gene07405-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene07405-v1.0-hybrid T287255_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna07405.1-v1.0-hybrid Myb 493 543

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.011G058300 Gossypium raimondii Gorai.011G058300 N 0.810
Aquca_076_00106 Aquilegia coerulea Aquca_076_00106 N 0.766
Bostr.10273s0086 Boechera stricta Bostr.10273s0086 N 0.680
Cagra.0824s0115 Capsella grandiflora Cagra.0824s0115 N 0.686
Cagra.1013s0036 Capsella grandiflora Cagra.1013s0036 N 0.680
Carubv10012426m.g Capsella rubella Carubv10012426m.g N 0.686
Carubv10019876m.g Capsella rubella Carubv10019876m.g N 0.680
Ciclev10025094m.g Citrus clementina Ciclev10025094m.g N 0.810
Eucgr.J00905 Eucalyptus grandis Eucgr.J00905 N 0.681
Eucgr.J02823 Eucalyptus grandis Eucgr.J02823 N 0.667
evm.TU.supercontig_25.106 Carica papaya evm.TU.supercontig_25.106 N 0.742
mgf013194m Mimulus guttatus mgf013194m N 0.761
MDP0000261067 Malus domestica MDP0000261067 N 0.891
MDP0000279204 Malus domestica MDP0000279204 N 0.891
orange1.1g006062m.g Citrus sinensis orange1.1g006062m.g N 0.810
SapurV1A.0002s0820 Salix purpurea SapurV1A.0002s0820 N 0.750
SapurV1A.0177s0370 Salix purpurea SapurV1A.0177s0370 N 0.750
SapurV1A.5380s0010 Salix purpurea SapurV1A.5380s0010 N 0.750
Thhalv10018282m.g Eutrema salsugineum Thhalv10018282m.g N 0.698
PK02666.1 Cannabis sativa PK02666.1 N 0.810
PDK_20s1327961g002 Phoenix dactylifera PDK_20s1327961g002 N 0.706
PDK_20s1505221g001 Phoenix dactylifera PDK_20s1505221g001 N 0.722
TCM_029115 Theobroma cacao TCM_029115 N 0.810
TRFL6 Arabidopsis thaliana AT1G72650 N 0.670
TRFL6 Arabidopsis lyrata fgenesh2_kg.2__1530__AT1G72650.2 N 0.680
GLYMA07G04160 Glycine max GLYMA07G04160 N 0.742
GLYMA16G00870 Glycine max GLYMA16G00870 N 0.742
GSMUA_Achr5G24660_001 Musa acuminata GSMUA_Achr5G24660_001 N 0.792
MTR_8g020330 Medicago truncatula MTR_8g020330 N 0.730
PGSC0003DMG400002481 Solanum tuberosum PGSC0003DMG400002481 N 0.667
POPTR_0001s17020 Populus trichocarpa POPTR_0001s17020 N 0.750
POPTR_0003s06240 Populus trichocarpa POPTR_0003s06240 N 0.750
PRUPE_ppa003052mg Prunus persica PRUPE_ppa003052mg N 0.891
AMTR_s00024p00216510 Amborella trichopoda AMTR_s00024p00216510 N 0.750
VIT_06s0004g02520 Vitis vinifera VIT_06s0004g02520 N 0.688
VIT_09s0002g01480 Vitis vinifera VIT_09s0002g01480 N 0.750
Ca_10028 Cicer arietinum Ca_10028 N 0.760
Cla015802 Citrullus lanatus Cla015802 N 0.794
Pm013286 Prunus mume Pm013286 N 0.891
29706.m001295 Ricinus communis 29706.m001295 N 0.750
cassava159.valid.m1 Manihot esculenta cassava159.valid.m1 N 0.750
cassava31568.valid.m1 Manihot esculenta cassava31568.valid.m1 N 0.750
Cucsa.360310 Cucumis sativus Cucsa.360310 N 0.698