MDP0000199939 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000199939 T288405_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.701 0.774
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.701 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000199939 Myb 237 283
MDP0000199939 Myb 289 334

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ004277 Culex pipiens CpipJ_CPIJ004277 N 0.000