CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g011420m.g
(
Citrus sinensis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
orange1.1g011420m.g
T288776_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g011420m
Myb
357
406
RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLL
orange1.1g012166m
Myb
340
389
RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLL
orange1.1g014097m
Myb
357
406
RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLL
orange1.1g014674m
Myb
291
340
RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLL
orange1.1g014697m
Myb
291
340
RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLL
orange1.1g014780m
Myb
290
339
RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLL
orange1.1g015007m
Myb
285
334
RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLL
orange1.1g015050m
Myb
285
334
RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLL
orange1.1g021209m
Myb
187
236
RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLL
Links
Other
Myb/SANT
family TFs
Other
Citrus sinensis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV04_00541
Capronia semiimmersa
PV04_00541
N
PMAA_001790
Penicillium marneffei
PMAA_001790
N
Z518_04980
Rhinocladiella mackenziei
Z518_04980
N
TSTA_099190
Talaromyces stipitatus
TSTA_099190
N
PV08_00876
Exophiala spinifera
PV08_00876
N
PV06_05578
Exophiala oligosperma
PV06_05578
N
PV06_00861
Exophiala oligosperma
PV06_00861
N
PV05_09876
Exophiala xenobiotica
PV05_09876
N
PV04_04366
Capronia semiimmersa
PV04_04366
N
AUEXF2481DRAFT_234640
Aureobasidium subglaciale
AUEXF2481DRAFT_234640
N
PMAA_001790
Talaromyces marneffei
PMAA_001790
N
M438DRAFT_363806
Aureobasidium pullulans
M438DRAFT_363806
N
M437DRAFT_60050
Aureobasidium melanogenum
M437DRAFT_60050
N
G647_01486
Cladophialophora carrionii
G647_01486
N
CADANGAG00007889
Aspergillus niger
CADANGAG00007889
N
AFUA_2G15260
Aspergillus fumigatus
CADAFUAG00004604
N
ACLA_074230
Aspergillus clavatus
CADACLAG00006381
N
AUEXF2481DRAFT_701448
Aureobasidium subglaciale
AUEXF2481DRAFT_701448
N