orange1.1g011420m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g011420m.g T288776_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g011420m Myb 357 406
orange1.1g012166m Myb 340 389
orange1.1g014097m Myb 357 406
orange1.1g014674m Myb 291 340
orange1.1g014697m Myb 291 340
orange1.1g014780m Myb 290 339
orange1.1g015007m Myb 285 334
orange1.1g015050m Myb 285 334
orange1.1g021209m Myb 187 236

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10011603m.g Citrus clementina Ciclev10011603m.g N 0.909
evm.TU.supercontig_92.112 Carica papaya evm.TU.supercontig_92.112 N 0.880
Cagra.0666s0044 Capsella grandiflora Cagra.0666s0044 N 0.770
Carubv10024894m.g Capsella rubella Carubv10024894m.g N 0.770
Bostr.23794s0389 Boechera stricta Bostr.23794s0389 N 0.770
Thhalv10016738m.g Eutrema salsugineum Thhalv10016738m.g N 0.741
TCM_022189 Theobroma cacao TCM_022189 N 0.737
Gorai.002G247800 Gossypium raimondii Gorai.002G247800 N 0.729
Eucgr.K01251 Eucalyptus grandis Eucgr.K01251 N 0.715
TRFL8 Arabidopsis lyrata fgenesh2_kg.4__1746__AT2G37025.1 N 0.712
GLYMA13G20760 Glycine max GLYMA13G20760 N 0.678
GLYMA10G06560 Glycine max GLYMA10G06560 N 0.678
30078.m002313 Ricinus communis 30078.m002313 N 0.677
PK07211.1 Cannabis sativa PK07211.1 N 0.666
cassava14546.m1 Manihot esculenta cassava14546.m1 N 0.664
cassava11812.valid.m1 Manihot esculenta cassava11812.valid.m1 N 0.664
TRFL8 Arabidopsis thaliana AT2G37025 N 0.664
cassava11813.valid.m1 Manihot esculenta cassava11813.valid.m1 N 0.664
cassava14545.m1 Manihot esculenta cassava14545.m1 N 0.664
cassava11814.valid.m1 Manihot esculenta cassava11814.valid.m1 N 0.664
POPTR_0006s12820 Populus trichocarpa POPTR_0006s12820 N 0.661
SapurV1A.3824s0010 Salix purpurea SapurV1A.3824s0010 N 0.661
SapurV1A.0141s0180 Salix purpurea SapurV1A.0141s0180 N 0.661