POPTR_0006s12820 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0006s12820 T278303_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s12820.1 Myb 443 492
POPTR_0006s12820.2 Myb 443 492
POPTR_0006s12820.3 Myb 443 492
POPTR_0006s12820.4 Myb 266 315

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0141s0180 Salix purpurea SapurV1A.0141s0180 N 0.909
SapurV1A.3824s0010 Salix purpurea SapurV1A.3824s0010 N 0.909
30078.m002313 Ricinus communis 30078.m002313 N 0.847
cassava11812.valid.m1 Manihot esculenta cassava11812.valid.m1 N 0.824
cassava11813.valid.m1 Manihot esculenta cassava11813.valid.m1 N 0.824
cassava11814.valid.m1 Manihot esculenta cassava11814.valid.m1 N 0.824
cassava14545.m1 Manihot esculenta cassava14545.m1 N 0.824
cassava14546.m1 Manihot esculenta cassava14546.m1 N 0.824
cassava23545.valid.m1 Manihot esculenta cassava23545.valid.m1 N 0.713
cassava23546.valid.m1 Manihot esculenta cassava23546.valid.m1 N 0.713
Gorai.002G247800 Gossypium raimondii Gorai.002G247800 N 0.711
TCM_022189 Theobroma cacao TCM_022189 N 0.703
Cla018589 Citrullus lanatus Cla018589 N 0.699
Cucsa.124550 Cucumis sativus Cucsa.124550 N 0.699
evm.TU.supercontig_92.112 Carica papaya evm.TU.supercontig_92.112 N 0.690
MTR_1g063940 Medicago truncatula MTR_1g063940 N 0.668
PK07211.1 Cannabis sativa PK07211.1 N 0.666
Ciclev10011603m.g Citrus clementina Ciclev10011603m.g N 0.661
orange1.1g011420m.g Citrus sinensis orange1.1g011420m.g N 0.661