Cucsa.124550 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.124550 T284423_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.124550.10 Myb 241 291
Cucsa.124550.11 Myb 196 246
Cucsa.124550.12 Myb 165 215
Cucsa.124550.1 Myb 353 403
Cucsa.124550.2 Myb 322 372
Cucsa.124550.3 Myb 322 372
Cucsa.124550.4 Myb 322 372
Cucsa.124550.5 Myb 321 371
Cucsa.124550.6 Myb 272 322
Cucsa.124550.7 Myb 252 302
Cucsa.124550.8 Myb 247 297
Cucsa.124550.9 Myb 241 291

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla018589 Citrullus lanatus Cla018589 N 0.909
30078.m002313 Ricinus communis 30078.m002313 N 0.716
GLYMA10G06560 Glycine max GLYMA10G06560 N 0.715
GLYMA13G20760 Glycine max GLYMA13G20760 N 0.715
cassava11812.valid.m1 Manihot esculenta cassava11812.valid.m1 N 0.702
cassava11813.valid.m1 Manihot esculenta cassava11813.valid.m1 N 0.702
cassava11814.valid.m1 Manihot esculenta cassava11814.valid.m1 N 0.702
cassava14545.m1 Manihot esculenta cassava14545.m1 N 0.702
cassava14546.m1 Manihot esculenta cassava14546.m1 N 0.702
POPTR_0006s12820 Populus trichocarpa POPTR_0006s12820 N 0.699
SapurV1A.0141s0180 Salix purpurea SapurV1A.0141s0180 N 0.699
SapurV1A.3824s0010 Salix purpurea SapurV1A.3824s0010 N 0.699
CM1729.130.nc Lotus japonicus CM1729.130.nc N 0.694