CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0141s0180
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.0141s0180
T289612_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0141s0180.1.p
Myb
443
492
RMWTTPEVMKLIDGIAQYGTGRWTDIKKLMFSSTAYRTPIDLRDKWRNLL
SapurV1A.0141s0180.2.p
Myb
443
492
RMWTTPEVMKLIDGIAQYGTGRWTDIKKLMFSSTAYRTPIDLRDKWRNLL
SapurV1A.0141s0180.3.p
Myb
443
492
RMWTTPEVMKLIDGIAQYGTGRWTDIKKLMFSSTAYRTPIDLRDKWRNLL
SapurV1A.0141s0180.4.p
Myb
422
471
RMWTTPEVMKLIDGIAQYGTGRWTDIKKLMFSSTAYRTPIDLRDKWRNLL
SapurV1A.0141s0180.5.p
Myb
422
471
RMWTTPEVMKLIDGIAQYGTGRWTDIKKLMFSSTAYRTPIDLRDKWRNLL
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0006s12820
Populus trichocarpa
POPTR_0006s12820
N
0.909
SapurV1A.3824s0010
Salix purpurea
SapurV1A.3824s0010
N
0.909
30078.m002313
Ricinus communis
30078.m002313
N
0.847
cassava11812.valid.m1
Manihot esculenta
cassava11812.valid.m1
N
0.824
cassava11813.valid.m1
Manihot esculenta
cassava11813.valid.m1
N
0.824
cassava11814.valid.m1
Manihot esculenta
cassava11814.valid.m1
N
0.824
cassava14545.m1
Manihot esculenta
cassava14545.m1
N
0.824
cassava14546.m1
Manihot esculenta
cassava14546.m1
N
0.824
cassava23545.valid.m1
Manihot esculenta
cassava23545.valid.m1
N
0.713
cassava23546.valid.m1
Manihot esculenta
cassava23546.valid.m1
N
0.713
Gorai.002G247800
Gossypium raimondii
Gorai.002G247800
N
0.711
TCM_022189
Theobroma cacao
TCM_022189
N
0.703
Cla018589
Citrullus lanatus
Cla018589
N
0.699
Cucsa.124550
Cucumis sativus
Cucsa.124550
N
0.699
evm.TU.supercontig_92.112
Carica papaya
evm.TU.supercontig_92.112
N
0.690
MTR_1g063940
Medicago truncatula
MTR_1g063940
N
0.668
PK07211.1
Cannabis sativa
PK07211.1
N
0.666
Ciclev10011603m.g
Citrus clementina
Ciclev10011603m.g
N
0.661
orange1.1g011420m.g
Citrus sinensis
orange1.1g011420m.g
N
0.661