Pavir.Ba03827 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ba03827 T289026_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba03827.1.p Myb 167 188
Pavir.Ba03827.1.p Myb 222 259
Pavir.Ba03827.1.p Myb 266 313
Pavir.Ba03827.1.p Myb 319 364
Pavir.Ba03827.1.p Myb 371 417
Pavir.Ba03827.1.p Myb 424 467

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA024846 Oryza indica BGIOSGA024846 N 0.758
GRMZM2G051793 Zea mays GRMZM2G051793 N 0.738
LPERR07G02310 Leersia perrieri LPERR07G02310 N 0.754
OB07G12010 Oryza brachyantha OB07G12010 N 0.748
OBART07G02450 Oryza barthii OBART07G02450 N 0.751
OGLUM07G14260 Oryza glumaepatula OGLUM07G14260 N 0.753
OLONG_009970 Oryza longistaminata OLONG_009970 N 0.753
OMERI01G11970 Oryza meridionalis OMERI01G11970 N 0.753
ONIVA04G19340 Oryza nivara ONIVA04G19340 N 0.756
OPUNC07G02500 Oryza punctata OPUNC07G02500 N 0.733
ORGLA07G0021600 Oryza glaberrima ORGLA07G0021600 N 0.751
ORUFI07G02320 Oryza rufipogon ORUFI07G02320 N 0.758
Si028919m.g Setaria italica Si028919m.g N 0.838
Pavir.Bb00243 Panicum virgatum Pavir.Bb00243 N 0.901