Pavir.J05591 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J05591 T289332_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05591.1.p Myb 777 836
Pavir.J05591.2.p Myb 625 684

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC05G25360 Oryza punctata OPUNC05G25360 N
Pavir.J05536 Panicum virgatum Pavir.J05536 N
Pavir.J02804 Panicum virgatum Pavir.J02804 N
TRIUR3_15558 Triticum urartu TRIUR3_15558 N
Traes_1DL_F23E9DAA9 Triticum aestivum Traes_1DL_F23E9DAA9 N
Traes_1BL_3E662FC82 Triticum aestivum Traes_1BL_3E662FC82 N
Traes_1AL_2F1278623 Triticum aestivum Traes_1AL_2F1278623 N
Si021619m.g Setaria italica Si021619m.g N
Sb09g030380 Sorghum bicolor Sb09g030380 N
Sb09g030350 Sorghum bicolor Sb09g030350 N
OS05G0589200 Oryza sativa OS05G0589200 N
ORUFI05G29710 Oryza rufipogon ORUFI05G29710 N
ORGLA05G0241100 Oryza glaberrima ORGLA05G0241100 N
BGIOSGA020470 Oryza indica BGIOSGA020470 N
ONIVA05G29730 Oryza nivara ONIVA05G29730 N
OMERI05G23660 Oryza meridionalis OMERI05G23660 N
OLONG_010405 Oryza longistaminata OLONG_010405 N
OGLUM05G29230 Oryza glumaepatula OGLUM05G29230 N
OBART05G27740 Oryza barthii OBART05G27740 N
OB05G35290 Oryza brachyantha OB05G35290 N
MLOC_12452 Hordeum vulgare MLOC_12452 N
LPERR05G23430 Leersia perrieri LPERR05G23430 N
GRMZM5G830932 Zea mays GRMZM5G830932 N
F775_05183 Aegilops tauschii F775_05183 N
BRADI2G14567 Brachypodium distachyon BRADI2G14567 N
BRADI2G14550 Brachypodium distachyon BRADI2G14550 N