Pavir.J10623 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J10623 T289359_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.744 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J10623.1.p Myb 21 71

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
E(spl)mdelta-HLH Drosophila melanogaster FBgn0002734 D
GA20991 Drosophila pseudoobscura FBgn0080980 I
HLHmdelta Drosophila yakuba FBgn0082706 I
GF16795 Drosophila ananassae FBgn0093816 I
GG11449 Drosophila erecta FBgn0103748 I
GH19451 Drosophila grimshawi FBgn0126916 I
GI24685 Drosophila mojavensis FBgn0147407 I
GL21813 Drosophila persimilis FBgn0159406 I
GM10293 Drosophila sechellia FBgn0165244 I
GJ23902 Drosophila virilis FBgn0210996 I
GK14454 Drosophila willistoni FBgn0216460 I
MDOA010130 Musca domestica MDOA010130 I