Thhalv10008620m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10008620m.g T290005_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.894 0.979
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.692 0.787
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.682 0.723
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.682 0.723
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.667 0.723
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.667 0.723
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.667 0.723
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.667 0.723
PHR1
M02302_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7249 		0.661 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10008620m Myb 26 77

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

504 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000216918 Malus domestica MDP0000216918 N
mgf009009m Mimulus guttatus mgf009009m N
Aquca_012_00145 Aquilegia coerulea Aquca_012_00145 N
Ciclev10017220m.g Citrus clementina Ciclev10017220m.g N
Eucgr.A01720 Eucalyptus grandis Eucgr.A01720 N
Eucgr.D01323 Eucalyptus grandis Eucgr.D01323 N
Eucgr.K00803 Eucalyptus grandis Eucgr.K00803 N
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N
gene23919-v1.0-hybrid Fragaria vesca gene23919-v1.0-hybrid N
Gorai.002G083400 Gossypium raimondii Gorai.002G083400 N
Gorai.008G172400 Gossypium raimondii Gorai.008G172400 N
Gorai.010G252300 Gossypium raimondii Gorai.010G252300 N
Gorai.010G253000 Gossypium raimondii Gorai.010G253000 N
Lus10007643.g Linum usitatissimum Lus10007643.g N
Lus10018366.g Linum usitatissimum Lus10018366.g N
Lus10018414.g Linum usitatissimum Lus10018414.g N
cassava4691.m1 Manihot esculenta cassava4691.m1 N
MDP0000270078 Malus domestica MDP0000270078 N
MDP0000387366 Malus domestica MDP0000387366 N
MDP0000499190 Malus domestica MDP0000499190 N
SapurV1A.0345s0340 Salix purpurea SapurV1A.0345s0340 N
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N
SapurV1A.0722s0160 Salix purpurea SapurV1A.0722s0160 N
SapurV1A.0779s0100 Salix purpurea SapurV1A.0779s0100 N
SapurV1A.0928s0060 Salix purpurea SapurV1A.0928s0060 N
SapurV1A.1106s0040 Salix purpurea SapurV1A.1106s0040 N
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N
PK11198.1 Cannabis sativa PK11198.1 N
PDK_20s1307674g001 Phoenix dactylifera PDK_20s1307674g001 N
PDK_20s1335581g001 Phoenix dactylifera PDK_20s1335581g001 N
TCM_011327 Theobroma cacao TCM_011327 N
AMTR_s00147p00088570 Amborella trichopoda AMTR_s00147p00088570 N
GLYMA06G45941 Glycine max GLYMA06G45941 N
GLYMA12G10790 Glycine max GLYMA12G10790 N
GLYMA12G32130 Glycine max GLYMA12G32130 N
GSMUA_Achr10G09220_001 Musa acuminata GSMUA_Achr10G09220_001 N
MTR_4g046737 Medicago truncatula MTR_4g046737 N
POPTR_0004s02060 Populus trichocarpa POPTR_0004s02060 N
POPTR_0007s02510 Populus trichocarpa POPTR_0007s02510 N
POPTR_0011s00390 Populus trichocarpa POPTR_0011s00390 N
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N
POPTR_0017s06470 Populus trichocarpa POPTR_0017s06470 N
PRUPE_ppa014728mg Prunus persica PRUPE_ppa014728mg N
PRUPE_ppa023926mg Prunus persica PRUPE_ppa023926mg N
Solyc07g052490.2 Solanum lycopersicum Solyc07g052490.2 N
AMTR_s00057p00119300 Amborella trichopoda AMTR_s00057p00119300 N
TCM_015351 Theobroma cacao TCM_015351 N
TCM_030163 Theobroma cacao TCM_030163 N
TCM_046858 Theobroma cacao TCM_046858 N
VIT_10s0116g00500 Vitis vinifera VIT_10s0116g00500 N
VIT_12s0059g02360 Vitis vinifera VIT_12s0059g02360 N
Pm009748 Prunus mume Pm009748 N
29842.m003592 Ricinus communis 29842.m003592 N
30086.m000210 Ricinus communis 30086.m000210 N
30169.m006531 Ricinus communis 30169.m006531 N
cassava11157.m1 Manihot esculenta cassava11157.m1 N
cassava23225.valid.m1 Manihot esculenta cassava23225.valid.m1 N
cassava23226.valid.m1 Manihot esculenta cassava23226.valid.m1 N
cassava24285.valid.m1 Manihot esculenta cassava24285.valid.m1 N
cassava24286.valid.m1 Manihot esculenta cassava24286.valid.m1 N