Thhalv10028806m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10028806m.g T290169_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.865 0.957
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.865 0.957
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.865 0.957
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.837 0.913
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.837 0.913
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.837 0.913
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.827 0.891
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.819 0.870
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.819 0.870
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.819 0.870
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.819 0.870
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.819 0.870
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.798 0.848
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.737 0.696
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.701 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.701 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.701 0.652
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.691 0.674
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.691 0.674
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.681 0.652
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.677 0.630
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.677 0.630
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.677 0.630
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.677 0.630
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.677 0.630
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10028806m Myb 72 117
Thhalv10028807m Myb 72 117

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

433 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FERD3L Homo sapiens ENSG00000146618 D
Fer3 Drosophila melanogaster FBgn0037937 D
CpipJ_CPIJ010303 Culex pipiens CpipJ_CPIJ010303 I
CpipJ_CPIJ012703 Culex pipiens CpipJ_CPIJ012703 I
AAEL006206 Aedes aegypti AAEL006206 I
ACYPI54231 Acyrthosiphon pisum ACYPI54231 I
ADAC008115 Anopheles darlingi ADAC008115 I
AGAP003756 Anopheles gambiae AGAP003756 I
BGIBMGA004895 Bombyx mori BGIBMGA004895 I
CPIJ010303 Culex quinquefasciatus CPIJ010303 I
CPIJ012703 Culex quinquefasciatus CPIJ012703 I
DAPPUDRAFT_99035 Daphnia pulex DAPPUDRAFT_99035 I
ENSACAG00000011821 Anolis carolinensis ENSACAG00000011821 I
ENSAMEG00000019030 Ailuropoda melanoleuca ENSAMEG00000019030 I
ENSAMXG00000025611 Astyanax mexicanus ENSAMXG00000025611 I
ENSAPLG00000001417 Anas platyrhynchos ENSAPLG00000001417 I
FERD3L Bos taurus ENSBTAG00000039955 I
FERD3L Canis familiaris ENSCAFG00000002506 I
ENSCSAG00000019609 Chlorocebus sabaeus ENSCSAG00000019609 I
ferd3l Danio rerio ENSDARG00000092160 I
FERD3L Dasypus novemcinctus ENSDNOG00000037813 I
Ferd3l Dipodomys ordii ENSDORG00000012867 I
FERD3L Equus caballus ENSECAG00000002518 I
FERD3L Erinaceus europaeus ENSEEUG00000004309 I
ENSFALG00000014487 Ficedula albicollis ENSFALG00000014487 I
FERD3L Felis catus ENSFCAG00000010289 I
FERD3L Gallus gallus ENSGALG00000010862 I
FERD3L Gorilla gorilla ENSGGOG00000021943 I
ENSLACG00000013215 Latimeria chalumnae ENSLACG00000013215 I
FERD3L Loxodonta africana ENSLAFG00000012782 I
ENSLOCG00000018351 Lepisosteus oculatus ENSLOCG00000018351 I
ENSMEUG00000016077 Macropus eugenii ENSMEUG00000016077 I
FERD3L Meleagris gallopavo ENSMGAG00000015843 I
ENSMICG00000010110 Microcebus murinus ENSMICG00000010110 I
FERD3L Myotis lucifugus ENSMLUG00000006930 I
FERD3L Macaca mulatta ENSMMUG00000011174 I
Ferd3l Mus musculus ENSMUSG00000046518 I
ENSNLEG00000019265 Nomascus leucogenys ENSNLEG00000019265 I
FERD3L Ornithorhynchus anatinus ENSOANG00000009615 I
ENSOARG00000008159 Ovis aries ENSOARG00000008159 I
FERD3L Oryctolagus cuniculus ENSOCUG00000016121 I
FERD3L Otolemur garnettii ENSOGAG00000014773 I
FERD3L Ochotona princeps ENSOPRG00000004265 I
FERD3L Oryzias latipes ENSORLG00000004008 I
ENSPANG00000010936 Papio anubis ENSPANG00000010936 I
FERD3L Procavia capensis ENSPCAG00000013680 I
ENSPPYG00000017753 Pongo abelii ENSPPYG00000017753 I
ENSPSIG00000000691 Pelodiscus sinensis ENSPSIG00000000691 I
FERD3L Pan troglodytes ENSPTRG00000018961 I
FERD3L Pteropus vampyrus ENSPVAG00000001711 I
Ferd3l Rattus norvegicus ENSRNOG00000011091 I
ENSSHAG00000013034 Sarcophilus harrisii ENSSHAG00000013034 I
FERD3L Sus scrofa ENSSSCG00000015371 I
ENSSTOG00000025739 Ictidomys tridecemlineatus ENSSTOG00000025739 I
FERD3L Tupaia belangeri ENSTBEG00000003400 I
FERD3L Taeniopygia guttata ENSTGUG00000002644 I
ENSTSYG00000010121 Tarsius syrichta ENSTSYG00000010121 I
GA19952 Drosophila pseudoobscura FBgn0079948 I
GF16621 Drosophila ananassae FBgn0093642 I
GG17199 Drosophila erecta FBgn0109426 I
GH19315 Drosophila grimshawi FBgn0126780 I
GI23534 Drosophila mojavensis FBgn0146260 I
GI23536 Drosophila mojavensis FBgn0146262 I
GL12254 Drosophila persimilis FBgn0149861 I
GM26078 Drosophila sechellia FBgn0180933 I
GD20641 Drosophila simulans FBgn0192107 I
GJ10284 Drosophila virilis FBgn0197570 I
GK11993 Drosophila willistoni FBgn0214004 I
GE10092 Drosophila yakuba FBgn0227974 I
GB43632 Apis mellifera GB43632 I
KGM_11961 Danaus plexippus KGM_11961 I
L798_14654 Zootermopsis nevadensis L798_14654 I
LotgiG70434 Lottia gigantea LotgiG70434 I
NV15852 Nasonia vitripennis NV15852 I
PHUM129440 Pediculus humanus PHUM129440 I
SINV15648 Solenopsis invicta SINV15648 I
SMAR003412 Strigamia maritima SMAR003412 I
SMAR006706 Strigamia maritima SMAR006706 I
TC001473 Tribolium castaneum TC001473 I
YQE_05939 Dendroctonus ponderosae YQE_05939 I
Aan_R001045 Calypte anna Aan_R001045 I
Afo_R003467 Aptenodytes forsteri Afo_R003467 I
Alligator_sinensis_CCG002586.1 Alligator sinensis Alligator_sinensis_CCG002586.1 I
Brh_R002964 Buceros rhinoceros Brh_R002964 I
Cflo_09551--XP_001121057.1_APIME Camponotus floridanus Cflo_09551--XP_001121057.1_APIME I
Cmyd_10011491 Chelonia mydas Cmyd_10011491 I
ENSP00000275461-D1 Bos grunniens ENSP00000275461-D1 I
ENSP00000275461 Macaca fascicularis ENSP00000275461 I
Gfo_R002784 Geospiza fortis Gfo_R002784 I
Hsal_03622--XP_001120620.1_APIME Harpegnathos saltator Hsal_03622--XP_001120620.1_APIME I
Myotis_brandtii_FERD3L_10031741 Myotis brandtii Myotis_brandtii_FERD3L_10031741 I
Ogr11551 Ophisaurus gracilis Ogr11551 I
estExt_fgenesh2_pg.C_2000006 Branchiostoma floridae estExt_fgenesh2_pg.C_2000006 I
estExt_fgenesh2_pg.C_2240018 Branchiostoma floridae estExt_fgenesh2_pg.C_2240018 I
Ocbimv22002150m.g Octopus bimaculoides Ocbimv22002150m.g I
Sakowv30007278m.g Saccoglossus kowalevskii Sakowv30007278m.g I
CLEC009418 Cimex lectularius CLEC009418 I
LCUP001463 Lucilia cuprina LCUP001463 I
LDEC012244 Leptinotarsa decemlineata LDEC012244 I
SMU15032200 Schmidtea mediterranea SMU15032200 I
SMU15040320 Schmidtea mediterranea SMU15040320 I
ferd3l Xenopus tropicalis XB-GENE-983144 I
AALB002484 Anopheles albimanus AALB002484 I
AARA010038 Anopheles arabiensis AARA010038 I
AATE012814 Anopheles atroparvus AATE012814 I
ACUA002550 Anopheles culicifacies ACUA002550 I
ADIR002542 Anopheles dirus ADIR002542 I
AEPI002821 Anopheles epiroticus AEPI002821 I
AFAF016092 Anopheles farauti AFAF016092 I
AFUN001530 Anopheles funestus AFUN001530 I
AMEC003522 Anopheles melas AMEC003522 I
AMEM014204 Anopheles merus AMEM014204 I
AMIN002935 Anopheles minimus AMIN002935 I
AQUA001453 Anopheles quadriannulatus AQUA001453 I
ASIS006982 Anopheles sinensis ASIS006982 I
ASTEI00910 Anopheles stephensi ASTEI00910 I
BGLB008796 Biomphalaria glabrata BGLB008796 I
LLOJ008652 Lutzomyia longipalpis LLOJ008652 I
MDOA004267 Musca domestica MDOA004267 I
MDOA011992 Musca domestica MDOA011992 I
PPAI004805 Phlebotomus papatasi PPAI004805 I