PDK_20s1888511g002 (Phoenix dactylifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PDK_20s1888511g002 T291210_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.753 0.804
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.747 0.870
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.709 0.783
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.709 0.783
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.709 0.783
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.709 0.783
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.699 0.804
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00 		Ostreococcus tauri
NRMCCTANN
NNTAGGKYN		 PBM
Weirauch et al.(2014)
pTH9424 		0.699 0.717
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.688 0.739
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.688 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1888511g002 Myb 5 56

Links

Other Myb/SANT family TFs
Other Phoenix dactylifera TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hivep2 Mus musculus ENSMUSG00000015501 I
HIVEP3 Procavia capensis ENSPCAG00000009633 N
Tal_R002635 Tyto alba Tal_R002635 N
Gfo_R008964 Geospiza fortis Gfo_R008964 N
Brh_R000375 Buceros rhinoceros Brh_R000375 N
Alligator_sinensis_CCG009304.1 Alligator sinensis Alligator_sinensis_CCG009304.1 N
ENSTSYG00000014718 Tarsius syrichta ENSTSYG00000014718 N
HIVEP3 Taeniopygia guttata ENSTGUG00000017331 N
ENSSTOG00000014879 Ictidomys tridecemlineatus ENSSTOG00000014879 N
HIVEP2 Sorex araneus ENSSARG00000005468 N
ENSSARG00000001213 Sorex araneus ENSSARG00000001213 N
ENSACAG00000008187 Anolis carolinensis ENSACAG00000008187 N
HIVEP3 Ochotona princeps ENSOPRG00000003135 N
ENSGMOG00000006318 Gadus morhua ENSGMOG00000006318 N
HIVEP2 Echinops telfairi ENSETEG00000018336 N
HIVEP3 Erinaceus europaeus ENSEEUG00000014689 N
Hivep3 Dipodomys ordii ENSDORG00000006074 N
HIVEP3 Callithrix jacchus ENSCJAG00000015848 N
HIVEP3 Choloepus hoffmanni ENSCHOG00000012407 N
ENSAMXG00000000714 Astyanax mexicanus ENSAMXG00000000714 N