Bo6g079180 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo6g079180 T292431_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC066
M00978_2.00 		Arabidopsis thaliana
NBNNHNBNNN
NNNVNDNNVN		 PBM
Lindemose et al.(2014)
NST2 		0.945 0.939
NAC043
M02370_2.00 		Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN		 PBM
Weirauch et al.(2014)
pTH8161 		0.944 0.912
NAC043
M07192_2.00 		Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA		 Dap-seq
OMalley et al.(2016)
NST1_colamp_a 		0.944 0.912
NAC043
M07193_2.00 		Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY		 Dap-seq
OMalley et al.(2016)
NST1_col_v31 		0.944 0.912
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.897 0.842
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.879 0.868
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.872 0.860
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g079180.1 NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I
ACHR003271 Anopheles christyi ACHR003271 I
TVAG_180150 Trichomonas vaginalis TVAG_180150 I
RPRC006380 Rhodnius prolixus RPRC006380 I
ssrp1a Danio rerio ENSDARG00000037397 I
CPIJ020011 Culex quinquefasciatus CPIJ020011 I
AAEL011425 Aedes aegypti AAEL011425 I
ACEP16595 Atta cephalotes ACEP16595 I
AFUN009600 Anopheles funestus AFUN009600 N
AARA003414 Anopheles arabiensis AARA003414 N
AATE003884 Anopheles atroparvus AATE003884 N
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N
ACOM026234 Anopheles coluzzii ACOM026234 N
ADIR000496 Anopheles dirus ADIR000496 N
AEPI002536 Anopheles epiroticus AEPI002536 N
AFAF013045 Anopheles farauti AFAF013045 N
LDEC020995 Leptinotarsa decemlineata LDEC020995 N
AMAM004579 Anopheles maculatus AMAM004579 N
AMEC001570 Anopheles melas AMEC001570 N
AMIN009362 Anopheles minimus AMIN009362 N
AQUA002991 Anopheles quadriannulatus AQUA002991 N
ASIS014507 Anopheles sinensis ASIS014507 N
MDOA007633 Musca domestica MDOA007633 N
PPAI002521 Phlebotomus papatasi PPAI002521 N
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N
GI18750 Drosophila mojavensis FBgn0141489 N
CPIJ002953 Culex quinquefasciatus CPIJ002953 N
AGAP012335 Anopheles gambiae AGAP012335 N
ENSAMXG00000014826 Astyanax mexicanus ENSAMXG00000014826 N
ADAC005115 Anopheles darlingi ADAC005115 N
Ssrp Drosophila melanogaster FBgn0010278 N
GF12460 Drosophila ananassae FBgn0089497 N
GG19998 Drosophila erecta FBgn0112197 N
GH21151 Drosophila grimshawi FBgn0128613 N
AALB010796 Anopheles albimanus AALB010796 N
GD25013 Drosophila simulans FBgn0196325 N
GJ21774 Drosophila virilis FBgn0208892 N
GE11532 Drosophila yakuba FBgn0229332 N
KGM_13851 Danaus plexippus KGM_13851 N
YQE_02071 Dendroctonus ponderosae YQE_02071 N
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N
LCUP005047 Lucilia cuprina LCUP005047 N
CGI_10024258 Crassostrea gigas CGI_10024258 N