Bra010193 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra010193 T292568_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NTL9
M02371_2.00 		Arabidopsis thaliana
ATTACTTAA
TTAAGTAAT		 PBM
Weirauch et al.(2014)
pTH8207 		0.904 0.842
NTL9
M11081_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBNAC_01 		0.904 0.842
NTL9
M11082_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBNAC_02 		0.904 0.842
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra010193.1-P NAC/NAM 15 141

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NTL9 Arabidopsis thaliana AT4G35580 D 0.904
Cagra.2350s0100 Capsella grandiflora Cagra.2350s0100 I 0.904
PK02019.1 Cannabis sativa PK02019.1 I 0.948
Carubv10007613m.g Capsella rubella Carubv10007613m.g I 0.904
Carubv10008529m.g Capsella rubella Carubv10008529m.g I 0.967
Ciclev10019282m.g Citrus clementina Ciclev10019282m.g I 0.935
Eucgr.E01095 Eucalyptus grandis Eucgr.E01095 I 0.943
evm.TU.supercontig_37.112 Carica papaya evm.TU.supercontig_37.112 I 0.949
gene01851-v1.0-hybrid Fragaria vesca gene01851-v1.0-hybrid I 0.920
Gorai.003G073300 Gossypium raimondii Gorai.003G073300 I 0.916
Gorai.008G261400 Gossypium raimondii Gorai.008G261400 I 0.947
Lus10008285.g Linum usitatissimum Lus10008285.g I 0.947
Lus10010148.g Linum usitatissimum Lus10010148.g I 0.925
Lus10033251.g Linum usitatissimum Lus10033251.g I 0.947
MDP0000266908 Malus domestica MDP0000266908 I 0.940
MDP0000658409 Malus domestica MDP0000658409 I 0.932
orange1.1g009388m.g Citrus sinensis orange1.1g009388m.g I 0.935
SapurV1A.0285s0090 Salix purpurea SapurV1A.0285s0090 I 0.918
Thhalv10007021m.g Eutrema salsugineum Thhalv10007021m.g I 0.972
NAC014 Arabidopsis thaliana AT1G33060 I 0.972
VIT_16s0098g00760 Vitis vinifera VIT_16s0098g00760 I 0.887
Bo5g086780 Brassica oleracea Bo5g086780 I 0.972
ANAC014 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002639 I 0.969
NTL9 Arabidopsis lyrata fgenesh2_kg.7__521__AT4G35580.1 I 0.904
POPTR_0001s45700 Populus trichocarpa POPTR_0001s45700 I 0.942
POPTR_0011s15230 Populus trichocarpa POPTR_0011s15230 I 0.945
PRUPE_ppa001291mg Prunus persica PRUPE_ppa001291mg I 0.946
TCM_015584 Theobroma cacao TCM_015584 I 0.949
VIT_02s0025g03020 Vitis vinifera VIT_02s0025g03020 I 0.939
Cagra.1443s0001 Capsella grandiflora Cagra.1443s0001 I 0.967
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.871
Pm029581 Prunus mume Pm029581 I 0.946
30068.m002619 Ricinus communis 30068.m002619 I 0.939
mgf022344m Mimulus guttatus mgf022344m I 0.937
Aquca_020_00034 Aquilegia coerulea Aquca_020_00034 I 0.887
Aquca_020_00035 Aquilegia coerulea Aquca_020_00035 I 0.898
Bostr.3359s0059 Boechera stricta Bostr.3359s0059 I 0.967
Bostr.7867s1416 Boechera stricta Bostr.7867s1416 I 0.904
SapurV1A.0666s0060 Salix purpurea SapurV1A.0666s0060 N 0.887