Bra028790 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra028790 T292644_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.965 0.947
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.965 0.947
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.965 0.947
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.965 0.947
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.959 0.939
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.959 0.939
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.959 0.939
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra028790.1-P NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tap Drosophila melanogaster FBgn0015550 D 0.000
GM25695 Drosophila sechellia FBgn0180552 I 0.000
TC013793 Tribolium castaneum TC013793 I 0.000
GE19908 Drosophila yakuba FBgn0237238 I 0.000
GK16635 Drosophila willistoni FBgn0218637 I 0.000
GJ12331 Drosophila virilis FBgn0199577 I 0.000
GD14703 Drosophila simulans FBgn0186381 I 0.000
GL15578 Drosophila persimilis FBgn0153182 I 0.000
GI12435 Drosophila mojavensis FBgn0135192 I 0.000
GH16587 Drosophila grimshawi FBgn0124058 I 0.000
GG13612 Drosophila erecta FBgn0105877 I 0.000
GF10169 Drosophila ananassae FBgn0087210 I 0.000
GA20508 Drosophila pseudoobscura FBgn0080502 I 0.000
neurog2.L Xenopus laevis XB-GENE-6077660 I 0.000
GB40611 Apis mellifera GB40611 N 0.000
neurog2.S Xenopus laevis XB-GENE-6252035 N 0.000
neurog2 Xenopus tropicalis XB-GENE-491040 N 0.000
HHAL003570-PA Halyomorpha halys HHAL003570-PA N 0.000
CLEC009121 Cimex lectularius CLEC009121 N 0.000
Hsal_12374--XP_001120974.1_APIME Harpegnathos saltator Hsal_12374--XP_001120974.1_APIME N 0.000
Cflo_08960--XP_001120974.1_APIME Camponotus floridanus Cflo_08960--XP_001120974.1_APIME N 0.000
YQE_06248 Dendroctonus ponderosae YQE_06248 N 0.000
MDOA011368 Musca domestica MDOA011368 N 0.000
SMAR010329 Strigamia maritima SMAR010329 N 0.000
SINV21318 Solenopsis invicta SINV21318 N 0.000
RPRC013552 Rhodnius prolixus RPRC013552 N 0.000
MCINX001572 Melitaea cinxia MCINX001572 N 0.000
L798_14901 Zootermopsis nevadensis L798_14901 N 0.000
KGM_19443 Danaus plexippus KGM_19443 N 0.000
ACEP10018 Atta cephalotes ACEP10018 N 0.000
ENSPSIG00000004125 Pelodiscus sinensis ENSPSIG00000004125 N 0.000
DAPPUDRAFT_48108 Daphnia pulex DAPPUDRAFT_48108 N 0.000
BGIBMGA004680 Bombyx mori BGIBMGA004680 N 0.000