CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G054277
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM2G054277
T293202_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G054277_P01
NAC/NAM
12
138
PPGFRFHPTDEELVVLYLRRKALARPLPAAVIPVVHDVARLDPWDVTGASEGEGYFFSLRRAPATGRRRRAGSGYWKATGKEKPVFLQCGGEQRQLLVGVKTALAFHRREPPPPSSRTGWVMHEYRL
GRMZM2G054277_P02
NAC/NAM
12
138
PPGFRFHPTDEELVVLYLRRKALARPLPAAVIPVVHDVARLDPWDVTGASEGEGYFFSLRRAPATGRRRRAGSGYWKATGKEKPVFLQCGGEQRQLLVGVKTALAFHRREPPPPSSRTGWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb10g022130
Sorghum bicolor
Sb10g022130
N
0.926
Traes_5DL_36AE1EF2B
Triticum aestivum
Traes_5DL_36AE1EF2B
N
0.987
Traes_5BS_9F043AE17
Triticum aestivum
Traes_5BS_9F043AE17
N
0.892
Traes_5BL_456C3408A
Triticum aestivum
Traes_5BL_456C3408A
N
0.984
Traes_5AS_E5FD82E36
Triticum aestivum
Traes_5AS_E5FD82E36
N
0.892
Solyc07g066330.2
Solanum lycopersicum
Solyc07g066330.2
N
0.936
Si030942m.g
Setaria italica
Si030942m.g
N
0.995
Si022747m.g
Setaria italica
Si022747m.g
N
0.894
Si014408m.g
Setaria italica
Si014408m.g
N
0.990
Si006435m.g
Setaria italica
Si006435m.g
N
0.905
SELMODRAFT_69131
Selaginella moellendorffii
SELMODRAFT_69131
N
0.971
SELMODRAFT_69130
Selaginella moellendorffii
SELMODRAFT_69130
N
0.971
TRIUR3_25303
Triticum urartu
TRIUR3_25303
N
0.905
Sb03g031000
Sorghum bicolor
Sb03g031000
N
0.910
Sb02g029460
Sorghum bicolor
Sb02g029460
N
0.989
OS12G0610600
Oryza sativa
OS12G0610600
N
0.910
OS09G0509100
Oryza sativa
OS09G0509100
N
0.993
OS08G0535800
Oryza sativa
OS08G0535800
N
0.965
ORUFI12G20640
Oryza rufipogon
ORUFI12G20640
N
0.910
ORUFI09G17170
Oryza rufipogon
ORUFI09G17170
N
0.993
ORUFI08G24230
Oryza rufipogon
ORUFI08G24230
N
0.963
ORUFI07G15560
Oryza rufipogon
ORUFI07G15560
N
0.902
ORGLA12G0157500
Oryza glaberrima
ORGLA12G0157500
N
0.908
ORGLA09G0123200
Oryza glaberrima
ORGLA09G0123200
N
0.993
Eucgr.H00826
Eucalyptus grandis
Eucgr.H00826
N
0.896
Pavir.J23083
Panicum virgatum
Pavir.J23083
N
0.994
Pavir.J11699
Panicum virgatum
Pavir.J11699
N
0.994
Pavir.J04931
Panicum virgatum
Pavir.J04931
N
0.992
Pavir.Fb00689
Panicum virgatum
Pavir.Fb00689
N
0.912
Pavir.Db01277
Panicum virgatum
Pavir.Db01277
N
0.916
Pavir.Da00789
Panicum virgatum
Pavir.Da00789
N
0.905
Lus10034999.g
Linum usitatissimum
Lus10034999.g
N
0.928
Lus10032004.g
Linum usitatissimum
Lus10032004.g
N
0.922
Lus10012927.g
Linum usitatissimum
Lus10012927.g
N
0.928
gene01364-v1.0-hybrid
Fragaria vesca
gene01364-v1.0-hybrid
N
0.918
Eucgr.K02205
Eucalyptus grandis
Eucgr.K02205
N
0.926
ORGLA08G0227400
Oryza glaberrima
ORGLA08G0227400
N
0.963
Eucgr.G01053
Eucalyptus grandis
Eucgr.G01053
N
0.893
Eucgr.G01047
Eucalyptus grandis
Eucgr.G01047
N
0.878
Aquca_003_00875
Aquilegia coerulea
Aquca_003_00875
N
0.943
mgf019352m
Mimulus guttatus
mgf019352m
N
0.934
mgf006124m
Mimulus guttatus
mgf006124m
N
0.956
Cucsa.157080
Cucumis sativus
Cucsa.157080
N
0.919
Cucsa.087480
Cucumis sativus
Cucsa.087480
N
0.904
Cla019597
Citrullus lanatus
Cla019597
N
0.930
Cla000384
Citrullus lanatus
Cla000384
N
0.904
Ca_22941
Cicer arietinum
Ca_22941
N
0.970
GRMZM2G100583
Zea mays
GRMZM2G100583
N
0.989
OB12G25170
Oryza brachyantha
OB12G25170
N
0.912
OB09G22520
Oryza brachyantha
OB09G22520
N
0.986
MLOC_72553
Hordeum vulgare
MLOC_72553
N
0.919
MLOC_64240
Hordeum vulgare
MLOC_64240
N
0.892
MLOC_55957
Hordeum vulgare
MLOC_55957
N
0.985
LPERR12G15510
Leersia perrieri
LPERR12G15510
N
0.912
LPERR09G12100
Leersia perrieri
LPERR09G12100
N
0.993
LPERR08G18520
Leersia perrieri
LPERR08G18520
N
0.984
GRMZM2G179049
Zea mays
GRMZM2G179049
N
0.996
GRMZM2G115721
Zea mays
GRMZM2G115721
N
0.917
GRMZM2G114850
Zea mays
GRMZM2G114850
N
0.938
OBART08G21800
Oryza barthii
OBART08G21800
N
0.960
GRMZM2G054252
Zea mays
GRMZM2G054252
N
0.981
F775_31820
Aegilops tauschii
F775_31820
N
0.892
BRADI4G34800
Brachypodium distachyon
BRADI4G34800
N
0.995
BRADI4G02060
Brachypodium distachyon
BRADI4G02060
N
0.907
BRADI3G41470
Brachypodium distachyon
BRADI3G41470
N
0.973
Bra002802
Brassica rapa
Bra002802
N
0.895
Bo9g126190
Brassica oleracea
Bo9g126190
N
0.895
BGIOSGA037778
Oryza indica
BGIOSGA037778
N
0.919
BGIOSGA031062
Oryza indica
BGIOSGA031062
N
0.993
BGIOSGA029063
Oryza indica
BGIOSGA029063
N
0.963
OMERI07G11790
Oryza meridionalis
OMERI07G11790
N
0.901
ORGLA07G0123600
Oryza glaberrima
ORGLA07G0123600
N
0.904
OPUNC12G16690
Oryza punctata
OPUNC12G16690
N
0.912
OPUNC09G14320
Oryza punctata
OPUNC09G14320
N
0.993
OPUNC08G19870
Oryza punctata
OPUNC08G19870
N
0.963
ONIVA12G17390
Oryza nivara
ONIVA12G17390
N
0.910
ONIVA09G17010
Oryza nivara
ONIVA09G17010
N
0.993
ONIVA08G24840
Oryza nivara
ONIVA08G24840
N
0.965
ONIVA07G13650
Oryza nivara
ONIVA07G13650
N
0.903
ONIVA07G09980
Oryza nivara
ONIVA07G09980
N
0.904
OMERI12G13180
Oryza meridionalis
OMERI12G13180
N
0.912
OMERI09G11810
Oryza meridionalis
OMERI09G11810
N
0.993
BGIOSGA025747
Oryza indica
BGIOSGA025747
N
0.903
OMERI07G09680
Oryza meridionalis
OMERI07G09680
N
0.872
OMERI06G13840
Oryza meridionalis
OMERI06G13840
N
0.981
OLONG_020119
Oryza longistaminata
OLONG_020119
N
0.960
OGLUM12G20140
Oryza glumaepatula
OGLUM12G20140
N
0.910
OGLUM09G16460
Oryza glumaepatula
OGLUM09G16460
N
0.993
OGLUM08G23090
Oryza glumaepatula
OGLUM08G23090
N
0.964
OGLUM07G14740
Oryza glumaepatula
OGLUM07G14740
N
0.904
OGLUM02G04830
Oryza glumaepatula
OGLUM02G04830
N
0.896
OBART12G18490
Oryza barthii
OBART12G18490
N
0.908
OBART09G15890
Oryza barthii
OBART09G15890
N
0.993