CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_37364
(
Hordeum vulgare
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MLOC_37364
T293669_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.892
0.526
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.871
0.605
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.871
0.605
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.871
0.605
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_37364.1
NAC/NAM
44
170
MPGFRFHPTEEELIEFYLRRKVDGKRFNIDLIASVDLYRYDPWDLPALASIGDKEWFFYVPRDRKYRNGDRPNRVTPSGYWKATGADRMVKVVEGNRSIGLKKTLVFYVGKAPKGLRSSWIMNEYRL
MLOC_37364.2
NAC/NAM
44
101
MPGFRFHPTEEELIEFYLRRKVDGKRFNIDLIASVDLYRYDPWDLPGTAQRRFHLIII
Links
Other
NAC/NAM
family TFs
Other
Hordeum vulgare
TFs
101 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI02G06020
Oryza meridionalis
OMERI02G06020
I
Thhalv10000498m.g
Eutrema salsugineum
Thhalv10000498m.g
I
Bo9g077970
Brassica oleracea
Bo9g077970
N
Bra029503
Brassica rapa
Bra029503
N
Gorai.001G225500
Gossypium raimondii
Gorai.001G225500
N