CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORUFI02G34050
(
Oryza rufipogon
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
ORUFI02G34050
T294878_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
JUB1
M07191_2.00
Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR
Dap-seq
OMalley et al.(2016)
ANAC042_col_a
0.933
0.719
ANAC094
M07236_2.00
Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR
Dap-seq
OMalley et al.(2016)
ANAC094_col_a
0.919
0.842
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI02G34050.1
NAC/NAM
17
143
LPGFRFHPTDEELVRFYLRRKIQQKSLPIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSDGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Oryza rufipogon
TFs
260 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm7351
Brugia malayi
Bm7351
N
0.000
ANCDUO_05536
Ancylostoma duodenale
ANCDUO_05536
N
0.000
ASU_03418
Ascaris suum
ASU_03418
N
0.000
EmuJ_000431700
Echinococcus multilocularis
EmuJ_000431700
N
0.000
EVEC_0000337101
Enterobius vermicularis
EVEC_0000337101
N
0.000
L596_g3529
Steinernema carpocapsae
L596_g3529
N
0.000
L892_g2650
Steinernema scapterisci
L892_g2650
N
0.000
MCOS_0000590201
Mesocestoides corti
MCOS_0000590201
N
0.000
nDi.2.2.2.g01972
Dirofilaria immitis
nDi.2.2.2.g01972
N
0.000
OFLC_0000167701
Onchocerca flexuosa
OFLC_0000167701
N
0.000
TCLT_0000259301
Thelazia callipaeda
TCLT_0000259301
N
0.000
TsM_000867800
Taenia solium
TsM_000867800
N
0.000
TTAC_0000959501
Hydatigera taeniaeformis
TTAC_0000959501
N
0.000