CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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JUB1
(
Arabidopsis thaliana
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AT2G43000
T292054_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Encodes a NAC transcription factor induced by hydrogen peroxide (H2O2. Involved in senescence. Over expression of the gene strongly delays senescence and enhances tolerance to various abiotic stresses.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
JUB1
M07191_2.00
Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR
Dap-seq
OMalley et al.(2016)
ANAC042_col_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC094
M07236_2.00
Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR
Dap-seq
OMalley et al.(2016)
ANAC094_col_a
0.879
0.702
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G43000.1
NAC/NAM
19
143
LPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRL
AT2G43000.2
NAC/NAM
2
65
RGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis thaliana
TFs
228 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
anac042
Arabidopsis lyrata
fgenesh2_kg.4__2460__AT2G43000.1
I
0.974
Carubv10023730m.g
Capsella rubella
Carubv10023730m.g
I
0.972
Bra004736
Brassica rapa
Bra004736
I
0.972
Bra037743
Brassica rapa
Bra037743
I
0.972
Bo4g192870
Brassica oleracea
Bo4g192870
I
0.972
Cagra.0202s0012
Capsella grandiflora
Cagra.0202s0012
I
0.972
Bostr.25993s0479
Boechera stricta
Bostr.25993s0479
I
0.968
Bra000282
Brassica rapa
Bra000282
I
0.967
Bo3g036290
Brassica oleracea
Bo3g036290
I
0.967
chr3.CM0176.150.nc
Lotus japonicus
chr3.CM0176.150.nc
I
0.959
Bo4g018490
Brassica oleracea
Bo4g018490
I
0.957
Thhalv10017054m.g
Eutrema salsugineum
Thhalv10017054m.g
I
0.956
cassava34069.m1
Manihot esculenta
cassava34069.m1
I
0.952
30169.m006343
Ricinus communis
30169.m006343
I
0.951
Ciclev10006695m.g
Citrus clementina
Ciclev10006695m.g
I
0.947
Ciclev10005465m.g
Citrus clementina
Ciclev10005465m.g
I
0.947
orange1.1g046948m.g
Citrus sinensis
orange1.1g046948m.g
I
0.947
POPTR_0007s08340
Populus trichocarpa
POPTR_0007s08340
I
0.946
cassava20477.m1
Manihot esculenta
cassava20477.m1
I
0.946
Lus10031767.g
Linum usitatissimum
Lus10031767.g
I
0.942
Lus10031189.g
Linum usitatissimum
Lus10031189.g
I
0.942
GLYMA02G45371
Glycine max
GLYMA02G45371
I
0.942
GLYMA14G03441
Glycine max
GLYMA14G03441
I
0.941
TCM_032393
Theobroma cacao
TCM_032393
I
0.940
chr2.LjT04L10.100.nc
Lotus japonicus
chr2.LjT04L10.100.nc
I
0.939
GLYMA15G40950
Glycine max
GLYMA15G40950
I
0.937
Sb02g024593
Sorghum bicolor
Sb02g024593
I
0.936
GRMZM2G159094
Zea mays
GRMZM2G159094
I
0.934
MTR_5g040420
Medicago truncatula
MTR_5g040420
I
0.933
OPUNC02G29910
Oryza punctata
OPUNC02G29910
I
0.933
OB02G39340
Oryza brachyantha
OB02G39340
I
0.933
ORGLA02G0278900
Oryza glaberrima
ORGLA02G0278900
I
0.933
ONIVA06G04660
Oryza nivara
ONIVA06G04660
I
0.933
OGLUM02G33000
Oryza glumaepatula
OGLUM02G33000
I
0.933
OLONG_016322
Oryza longistaminata
OLONG_016322
I
0.933
OMERI02G31030
Oryza meridionalis
OMERI02G31030
I
0.933
OBART02G32360
Oryza barthii
OBART02G32360
I
0.933
Pm014764
Prunus mume
Pm014764
I
0.933
TRIUR3_01901
Triticum urartu
TRIUR3_01901
I
0.933
LPERR02G26510
Leersia perrieri
LPERR02G26510
I
0.933
Pavir.Aa00706
Panicum virgatum
Pavir.Aa00706
I
0.933
Pavir.Ab02998
Panicum virgatum
Pavir.Ab02998
I
0.933
Traes_5DL_0713E8429
Triticum aestivum
Traes_5DL_0713E8429
I
0.933
Traes_5AL_F35B9FF8E
Triticum aestivum
Traes_5AL_F35B9FF8E
I
0.933
OS02G0745250
Oryza sativa
OS02G0745250
I
0.933
Sb04g028015
Sorghum bicolor
Sb04g028015
I
0.933
Si019308m.g
Setaria italica
Si019308m.g
I
0.933
ORUFI02G34050
Oryza rufipogon
ORUFI02G34050
I
0.933
Traes_5BL_38DFDFE41
Triticum aestivum
Traes_5BL_38DFDFE41
I
0.933
GRMZM2G100593
Zea mays
GRMZM2G100593
I
0.933
BGIOSGA009044
Oryza indica
BGIOSGA009044
I
0.933
BRADI4G30177
Brachypodium distachyon
BRADI4G30177
I
0.933
LjT46I09.50.nd
Lotus japonicus
LjT46I09.50.nd
I
0.932
Pavir.Bb02181
Panicum virgatum
Pavir.Bb02181
I
0.932
Gorai.001G091900
Gossypium raimondii
Gorai.001G091900
I
0.932
SapurV1A.0354s0230
Salix purpurea
SapurV1A.0354s0230
I
0.932
gene03833-v1.0-hybrid
Fragaria vesca
gene03833-v1.0-hybrid
I
0.931
GRMZM2G152543
Zea mays
GRMZM2G152543
I
0.931
Traes_6BL_A169A3ECB
Triticum aestivum
Traes_6BL_A169A3ECB
I
0.930
Traes_6DL_DA233B945
Triticum aestivum
Traes_6DL_DA233B945
I
0.930
BRADI3G59380
Brachypodium distachyon
BRADI3G59380
I
0.930
Traes_6AL_0D7866801
Triticum aestivum
Traes_6AL_0D7866801
I
0.930
PGSC0003DMG400001323
Solanum tuberosum
PGSC0003DMG400001323
I
0.930
CM1835.10.nc
Lotus japonicus
CM1835.10.nc
I
0.930
Solyc02g087920.2
Solanum lycopersicum
Solyc02g087920.2
I
0.930
Pm015876
Prunus mume
Pm015876
I
0.929
PGSC0003DMG400031266
Solanum tuberosum
PGSC0003DMG400031266
I
0.929
TCM_001955
Theobroma cacao
TCM_001955
I
0.929
Aquca_006_00295
Aquilegia coerulea
Aquca_006_00295
I
0.928
Traes_5AL_F2A49EB8E
Triticum aestivum
Traes_5AL_F2A49EB8E
I
0.928
Si032144m.g
Setaria italica
Si032144m.g
I
0.928
AC198937.4_FG005
Zea mays
AC198937.4_FG005
I
0.928
Pavir.Fa00893
Panicum virgatum
Pavir.Fa00893
I
0.928
Pavir.J08304
Panicum virgatum
Pavir.J08304
I
0.928
F775_04018
Aegilops tauschii
F775_04018
I
0.928
TRIUR3_04784
Triticum urartu
TRIUR3_04784
I
0.928
Si015514m.g
Setaria italica
Si015514m.g
I
0.928
Cla013684
Citrullus lanatus
Cla013684
I
0.927
PRUPE_ppa022043mg
Prunus persica
PRUPE_ppa022043mg
I
0.927
MTR_6g011860
Medicago truncatula
MTR_6g011860
I
0.927
anac042
Vitis vinifera
VIT_12s0028g00860
I
0.926
VIT_01s0026g02360
Vitis vinifera
VIT_01s0026g02360
I
0.926
OS08G0436700
Oryza sativa
OS08G0436700
I
0.926
ORUFI08G17800
Oryza rufipogon
ORUFI08G17800
I
0.926
OGLUM08G16650
Oryza glumaepatula
OGLUM08G16650
I
0.926
OMERI08G13180
Oryza meridionalis
OMERI08G13180
I
0.926
OPUNC08G13940
Oryza punctata
OPUNC08G13940
I
0.926
OBART08G15880
Oryza barthii
OBART08G15880
I
0.926
OB08G23420
Oryza brachyantha
OB08G23420
I
0.926
LPERR08G13170
Leersia perrieri
LPERR08G13170
I
0.926
BGIOSGA028728
Oryza indica
BGIOSGA028728
I
0.926
mgf026196m
Mimulus guttatus
mgf026196m
I
0.926
ONIVA08G17120
Oryza nivara
ONIVA08G17120
I
0.926
Sb07g021400
Sorghum bicolor
Sb07g021400
I
0.925
mgf025649m
Mimulus guttatus
mgf025649m
I
0.925
POPTR_0004s12850
Populus trichocarpa
POPTR_0004s12850
I
0.925
Ca_26322
Cicer arietinum
Ca_26322
I
0.925
PRUPE_ppa016710mg
Prunus persica
PRUPE_ppa016710mg
I
0.925
mgf023960m
Mimulus guttatus
mgf023960m
I
0.924
Solyc05g007550.1
Solanum lycopersicum
Solyc05g007550.1
I
0.923
Eucgr.I01940
Eucalyptus grandis
Eucgr.I01940
I
0.922
Lus10007263.g
Linum usitatissimum
Lus10007263.g
I
0.922
Lus10015367.g
Linum usitatissimum
Lus10015367.g
I
0.922
Aquca_002_00586
Aquilegia coerulea
Aquca_002_00586
I
0.922
orange1.1g015827m.g
Citrus sinensis
orange1.1g015827m.g
I
0.922
PK01104.1
Cannabis sativa
PK01104.1
I
0.922
GSMUA_Achr6G02680_001
Musa acuminata
GSMUA_Achr6G02680_001
I
0.922
MTR_8g467490
Medicago truncatula
MTR_8g467490
I
0.922
GLYMA08G41260
Glycine max
GLYMA08G41260
I
0.921
Ciclev10031623m.g
Citrus clementina
Ciclev10031623m.g
I
0.921
29032.m000021
Ricinus communis
29032.m000021
I
0.921
cassava38350.m1
Manihot esculenta
cassava38350.m1
I
0.921
Cucsa.285120
Cucumis sativus
Cucsa.285120
I
0.921
Aquca_026_00367
Aquilegia coerulea
Aquca_026_00367
I
0.921
Gorai.004G270400
Gossypium raimondii
Gorai.004G270400
I
0.921
29813.m001479
Ricinus communis
29813.m001479
I
0.921
GLYMA18G15020
Glycine max
GLYMA18G15020
I
0.921
MLOC_60079
Hordeum vulgare
MLOC_60079
I
0.921
POPTR_0002s05820
Populus trichocarpa
POPTR_0002s05820
I
0.920
Gorai.005G141200
Gossypium raimondii
Gorai.005G141200
I
0.920
Ca_18749
Cicer arietinum
Ca_18749
I
0.919
cassava45330.m1
Manihot esculenta
cassava45330.m1
I
0.919
BRADI3G37067
Brachypodium distachyon
BRADI3G37067
I
0.919
TRIUR3_04556
Triticum urartu
TRIUR3_04556
I
0.919
orange1.1g047852m.g
Citrus sinensis
orange1.1g047852m.g
I
0.919
SapurV1A.0552s0060
Salix purpurea
SapurV1A.0552s0060
I
0.918
Lus10037178.g
Linum usitatissimum
Lus10037178.g
I
0.918
Eucgr.G02506
Eucalyptus grandis
Eucgr.G02506
I
0.918
MDP0000241821
Malus domestica
MDP0000241821
I
0.918
evm.TU.supercontig_128.20
Carica papaya
evm.TU.supercontig_128.20
I
0.918
Gorai.009G357700
Gossypium raimondii
Gorai.009G357700
I
0.918
Gorai.006G017700
Gossypium raimondii
Gorai.006G017700
I
0.918
Lus10036749.g
Linum usitatissimum
Lus10036749.g
I
0.918
anac094
Vitis vinifera
VIT_14s0108g00860
I
0.918
MDP0000186765
Malus domestica
MDP0000186765
I
0.918
cassava39074.m1
Manihot esculenta
cassava39074.m1
I
0.917
Traes_5BL_2131D2B17
Triticum aestivum
Traes_5BL_2131D2B17
I
0.917
orange1.1g021785m.g
Citrus sinensis
orange1.1g021785m.g
I
0.917
POPTR_0005s22710
Populus trichocarpa
POPTR_0005s22710
I
0.917
GLYMA01G05680
Glycine max
GLYMA01G05680
I
0.917
VIT_19s0027g00870
Vitis vinifera
VIT_19s0027g00870
I
0.917
GLYMA02G11900
Glycine max
GLYMA02G11900
I
0.917
Ciclev10032203m.g
Citrus clementina
Ciclev10032203m.g
I
0.917
Ciclev10011891m.g
Citrus clementina
Ciclev10011891m.g
I
0.917
Traes_2BS_3B6ABF5E6
Triticum aestivum
Traes_2BS_3B6ABF5E6
I
0.917
GLYMA13G05350
Glycine max
GLYMA13G05350
I
0.916
Cla010347
Citrullus lanatus
Cla010347
I
0.916
GLYMA19G02580
Glycine max
GLYMA19G02580
I
0.916
cassava21730.m1
Manihot esculenta
cassava21730.m1
I
0.916
Cla005599
Citrullus lanatus
Cla005599
I
0.916
Pm006506
Prunus mume
Pm006506
I
0.915
Bo8g076410
Brassica oleracea
Bo8g076410
I
0.915
PRUPE_ppa022278mg
Prunus persica
PRUPE_ppa022278mg
I
0.915
Bostr.12659s0312
Boechera stricta
Bostr.12659s0312
I
0.914
Cucsa.118320
Cucumis sativus
Cucsa.118320
I
0.914
TCM_018508
Theobroma cacao
TCM_018508
I
0.914
POPTR_0017s11830
Populus trichocarpa
POPTR_0017s11830
I
0.914
Ca_15236
Cicer arietinum
Ca_15236
I
0.913
Traes_2BS_2244C64CC
Triticum aestivum
Traes_2BS_2244C64CC
I
0.912
Gorai.013G085000
Gossypium raimondii
Gorai.013G085000
I
0.912
Gorai.002G036700
Gossypium raimondii
Gorai.002G036700
I
0.912
Bo5g045190
Brassica oleracea
Bo5g045190
I
0.911
VIT_19s0027g00860
Vitis vinifera
VIT_19s0027g00860
I
0.911
Bra016294
Brassica rapa
Bra016294
I
0.911
Bra024677
Brassica rapa
Bra024677
I
0.911
Solyc02g069960.2
Solanum lycopersicum
Solyc02g069960.2
I
0.910
FEZ
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002274
I
0.909
Cagra.1150s0013
Capsella grandiflora
Cagra.1150s0013
I
0.909
FEZ
Arabidopsis thaliana
AT1G26870
I
0.909
Traes_2AS_C73DE621D
Triticum aestivum
Traes_2AS_C73DE621D
I
0.909
Carubv10011253m.g
Capsella rubella
Carubv10011253m.g
I
0.909
POPTR_0005s10080
Populus trichocarpa
POPTR_0005s10080
I
0.908
Traes_2DS_8C3F6A558
Triticum aestivum
Traes_2DS_8C3F6A558
I
0.907
F775_23219
Aegilops tauschii
F775_23219
I
0.907
Thhalv10007709m.g
Eutrema salsugineum
Thhalv10007709m.g
I
0.907
SapurV1A.2645s0010
Salix purpurea
SapurV1A.2645s0010
I
0.906
PGSC0003DMG400021119
Solanum tuberosum
PGSC0003DMG400021119
I
0.906
SapurV1A.2065s0010
Salix purpurea
SapurV1A.2065s0010
I
0.906
Traes_2DS_E2F2E9EAF
Triticum aestivum
Traes_2DS_E2F2E9EAF
I
0.905
F775_22220
Aegilops tauschii
F775_22220
I
0.905
Eucgr.F01463
Eucalyptus grandis
Eucgr.F01463
I
0.904
GSMUA_Achr7G00860_001
Musa acuminata
GSMUA_Achr7G00860_001
I
0.904
PDK_20s1311871g001
Phoenix dactylifera
PDK_20s1311871g001
I
0.903
SapurV1A.0085s0430
Salix purpurea
SapurV1A.0085s0430
I
0.902
Thhalv10019631m.g
Eutrema salsugineum
Thhalv10019631m.g
I
0.900
GLYMA08G41995
Glycine max
GLYMA08G41995
I
0.900
Si036447m.g
Setaria italica
Si036447m.g
I
0.898
Eucgr.K01228
Eucalyptus grandis
Eucgr.K01228
I
0.898
GSMUA_Achr5G02170_001
Musa acuminata
GSMUA_Achr5G02170_001
I
0.897
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.897
VIT_19s0027g00840
Vitis vinifera
VIT_19s0027g00840
I
0.897
Bra004403
Brassica rapa
Bra004403
I
0.895
Bo6g109250
Brassica oleracea
Bo6g109250
I
0.895
Carubv10021514m.g
Capsella rubella
Carubv10021514m.g
I
0.895
TRIUR3_04557
Triticum urartu
TRIUR3_04557
I
0.895
Gorai.004G270300
Gossypium raimondii
Gorai.004G270300
I
0.893
GLYMA18G13574
Glycine max
GLYMA18G13574
I
0.892
Gorai.012G054800
Gossypium raimondii
Gorai.012G054800
I
0.892
Cucsa.265620
Cucumis sativus
Cucsa.265620
I
0.890
Bo6g064260
Brassica oleracea
Bo6g064260
I
0.890
Cla023594
Citrullus lanatus
Cla023594
I
0.888
PK18158.1
Cannabis sativa
PK18158.1
I
0.887
VIT_19s0027g00880
Vitis vinifera
VIT_19s0027g00880
I
0.886
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.886
Solyc07g045030.2
Solanum lycopersicum
Solyc07g045030.2
I
0.885
Pavir.J26531
Panicum virgatum
Pavir.J26531
I
0.884
Thhalv10027860m.g
Eutrema salsugineum
Thhalv10027860m.g
I
0.884
Pavir.J03639
Panicum virgatum
Pavir.J03639
I
0.884
Cagra.5905s0003
Capsella grandiflora
Cagra.5905s0003
I
0.883
Carubv10006906m.g
Capsella rubella
Carubv10006906m.g
I
0.883
anac094
Arabidopsis lyrata
Al_scaffold_0007_3733
I
0.883
Bostr.10058s0013
Boechera stricta
Bostr.10058s0013
I
0.883
LPERR03G30390
Leersia perrieri
LPERR03G30390
I
0.883
Cagra.8367s0003
Capsella grandiflora
Cagra.8367s0003
I
0.883
GRMZM2G112548
Zea mays
GRMZM2G112548
I
0.882
MTR_5g090970
Medicago truncatula
MTR_5g090970
I
0.882
Pm011037
Prunus mume
Pm011037
I
0.881
F775_01324
Aegilops tauschii
F775_01324
I
0.881
ANAC094
Arabidopsis thaliana
AT5G39820
D
0.879
PRUPE_ppa026843mg
Prunus persica
PRUPE_ppa026843mg
I
0.878
AMTR_s00032p00126420
Amborella trichopoda
AMTR_s00032p00126420
I
0.877
Cla003401
Citrullus lanatus
Cla003401
I
0.877
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.877
Bra028441
Brassica rapa
Bra028441
I
0.877
Lus10030478.g
Linum usitatissimum
Lus10030478.g
I
0.874
SapurV1A.0094s0540
Salix purpurea
SapurV1A.0094s0540
I
0.872
POPTR_0001s11660
Populus trichocarpa
POPTR_0001s11660
I
0.872
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.871