Cagra.1150s0013 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.1150s0013 T297379_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JUB1
M07191_2.00 		Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR		 Dap-seq
OMalley et al.(2016)
ANAC042_col_a 		0.909 0.702
ANAC094
M07236_2.00 		Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR		 Dap-seq
OMalley et al.(2016)
ANAC094_col_a 		0.903 0.833
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1150s0013.1.p NAC/NAM 17 143

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FEZ Arabidopsis thaliana AT1G26870 I 0.976
Carubv10011253m.g Capsella rubella Carubv10011253m.g I 0.976
FEZ Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002274 I 0.975
Bostr.12659s0312 Boechera stricta Bostr.12659s0312 I 0.974
Thhalv10007709m.g Eutrema salsugineum Thhalv10007709m.g I 0.974
Bo5g045190 Brassica oleracea Bo5g045190 I 0.971
Bra024677 Brassica rapa Bra024677 I 0.971
Thhalv10019631m.g Eutrema salsugineum Thhalv10019631m.g I 0.968
Bo6g109250 Brassica oleracea Bo6g109250 I 0.967
Bo8g076410 Brassica oleracea Bo8g076410 I 0.966
Bra016294 Brassica rapa Bra016294 I 0.965
Bra004403 Brassica rapa Bra004403 I 0.960
MTR_5g040420 Medicago truncatula MTR_5g040420 I 0.960
GSMUA_Achr6G02680_001 Musa acuminata GSMUA_Achr6G02680_001 I 0.958
Ca_18749 Cicer arietinum Ca_18749 I 0.958
cassava39074.m1 Manihot esculenta cassava39074.m1 I 0.958
Carubv10021514m.g Capsella rubella Carubv10021514m.g I 0.958
BRADI4G30177 Brachypodium distachyon BRADI4G30177 I 0.956
PGSC0003DMG400031266 Solanum tuberosum PGSC0003DMG400031266 I 0.956
Traes_5AL_F35B9FF8E Triticum aestivum Traes_5AL_F35B9FF8E I 0.956
Traes_5BL_38DFDFE41 Triticum aestivum Traes_5BL_38DFDFE41 I 0.956
Traes_5DL_0713E8429 Triticum aestivum Traes_5DL_0713E8429 I 0.956
TRIUR3_01901 Triticum urartu TRIUR3_01901 I 0.956
mgf025649m Mimulus guttatus mgf025649m I 0.956
evm.TU.supercontig_128.20 Carica papaya evm.TU.supercontig_128.20 I 0.956
BGIOSGA009044 Oryza indica BGIOSGA009044 I 0.955
GRMZM2G100593 Zea mays GRMZM2G100593 I 0.955
LPERR02G26510 Leersia perrieri LPERR02G26510 I 0.955
OB02G39340 Oryza brachyantha OB02G39340 I 0.955
OBART02G32360 Oryza barthii OBART02G32360 I 0.955
OGLUM02G33000 Oryza glumaepatula OGLUM02G33000 I 0.955
OLONG_016322 Oryza longistaminata OLONG_016322 I 0.955
OMERI02G31030 Oryza meridionalis OMERI02G31030 I 0.955
ONIVA06G04660 Oryza nivara ONIVA06G04660 I 0.955
OPUNC02G29910 Oryza punctata OPUNC02G29910 I 0.955
ORGLA02G0278900 Oryza glaberrima ORGLA02G0278900 I 0.955
ORUFI02G34050 Oryza rufipogon ORUFI02G34050 I 0.955
OS02G0745250 Oryza sativa OS02G0745250 I 0.955
Sb04g028015 Sorghum bicolor Sb04g028015 I 0.955
Si019308m.g Setaria italica Si019308m.g I 0.955
Lus10007263.g Linum usitatissimum Lus10007263.g I 0.955
Lus10015367.g Linum usitatissimum Lus10015367.g I 0.955
Pavir.Aa00706 Panicum virgatum Pavir.Aa00706 I 0.955
Pavir.Ab02998 Panicum virgatum Pavir.Ab02998 I 0.955
Pavir.Bb02181 Panicum virgatum Pavir.Bb02181 I 0.955
GLYMA08G41260 Glycine max GLYMA08G41260 I 0.954
GLYMA18G15020 Glycine max GLYMA18G15020 I 0.954
GRMZM2G152543 Zea mays GRMZM2G152543 I 0.954
VIT_01s0026g02360 Vitis vinifera VIT_01s0026g02360 I 0.954
29813.m001479 Ricinus communis 29813.m001479 I 0.954
cassava38350.m1 Manihot esculenta cassava38350.m1 I 0.954
Aquca_002_00586 Aquilegia coerulea Aquca_002_00586 I 0.954
Cagra.8367s0003 Capsella grandiflora Cagra.8367s0003 I 0.954
Ciclev10031623m.g Citrus clementina Ciclev10031623m.g I 0.954
orange1.1g015827m.g Citrus sinensis orange1.1g015827m.g I 0.954
LjT46I09.50.nd Lotus japonicus LjT46I09.50.nd I 0.954
BRADI3G59380 Brachypodium distachyon BRADI3G59380 I 0.953
Traes_6AL_0D7866801 Triticum aestivum Traes_6AL_0D7866801 I 0.953
Traes_6BL_A169A3ECB Triticum aestivum Traes_6BL_A169A3ECB I 0.953
Traes_6DL_DA233B945 Triticum aestivum Traes_6DL_DA233B945 I 0.953
Pm015876 Prunus mume Pm015876 I 0.953
Eucgr.G02506 Eucalyptus grandis Eucgr.G02506 I 0.953
Gorai.005G141200 Gossypium raimondii Gorai.005G141200 I 0.953
orange1.1g047852m.g Citrus sinensis orange1.1g047852m.g I 0.953
Sb02g024593 Sorghum bicolor Sb02g024593 I 0.952
Si015514m.g Setaria italica Si015514m.g I 0.952
Si032144m.g Setaria italica Si032144m.g I 0.952
Lus10036749.g Linum usitatissimum Lus10036749.g I 0.952
Lus10037178.g Linum usitatissimum Lus10037178.g I 0.952
Pavir.Fa00893 Panicum virgatum Pavir.Fa00893 I 0.952
Pavir.J08304 Panicum virgatum Pavir.J08304 I 0.952
BGIOSGA028728 Oryza indica BGIOSGA028728 I 0.951
GLYMA01G05680 Glycine max GLYMA01G05680 I 0.951
GLYMA02G11900 Glycine max GLYMA02G11900 I 0.951
GRMZM2G159094 Zea mays GRMZM2G159094 I 0.951
LPERR08G13170 Leersia perrieri LPERR08G13170 I 0.951
OB08G23420 Oryza brachyantha OB08G23420 I 0.951
OBART08G15880 Oryza barthii OBART08G15880 I 0.951
OGLUM08G16650 Oryza glumaepatula OGLUM08G16650 I 0.951
OMERI08G13180 Oryza meridionalis OMERI08G13180 I 0.951
ONIVA08G17120 Oryza nivara ONIVA08G17120 I 0.951
OPUNC08G13940 Oryza punctata OPUNC08G13940 I 0.951
ORUFI08G17800 Oryza rufipogon ORUFI08G17800 I 0.951
29032.m000021 Ricinus communis 29032.m000021 I 0.951
cassava45330.m1 Manihot esculenta cassava45330.m1 I 0.951
Eucgr.I01940 Eucalyptus grandis Eucgr.I01940 I 0.951
gene03833-v1.0-hybrid Fragaria vesca gene03833-v1.0-hybrid I 0.951
AC198937.4_FG005 Zea mays AC198937.4_FG005 I 0.950
F775_04018 Aegilops tauschii F775_04018 I 0.950
OS08G0436700 Oryza sativa OS08G0436700 I 0.950
PGSC0003DMG400001323 Solanum tuberosum PGSC0003DMG400001323 I 0.950
Sb07g021400 Sorghum bicolor Sb07g021400 I 0.950
Solyc02g087920.2 Solanum lycopersicum Solyc02g087920.2 I 0.950
Solyc05g007550.1 Solanum lycopersicum Solyc05g007550.1 I 0.949
Ca_26322 Cicer arietinum Ca_26322 I 0.949
Aquca_006_00295 Aquilegia coerulea Aquca_006_00295 I 0.949
Ciclev10011891m.g Citrus clementina Ciclev10011891m.g I 0.949
Gorai.006G017700 Gossypium raimondii Gorai.006G017700 I 0.949
MTR_8g467490 Medicago truncatula MTR_8g467490 I 0.947
TCM_018508 Theobroma cacao TCM_018508 I 0.947
CM1835.10.nc Lotus japonicus CM1835.10.nc I 0.947
MTR_6g011860 Medicago truncatula MTR_6g011860 I 0.946
anac094 Vitis vinifera VIT_14s0108g00860 I 0.946
Cla010347 Citrullus lanatus Cla010347 I 0.946
Cucsa.285120 Cucumis sativus Cucsa.285120 I 0.946
mgf026196m Mimulus guttatus mgf026196m I 0.946
Gorai.013G085000 Gossypium raimondii Gorai.013G085000 I 0.946
SapurV1A.0552s0060 Salix purpurea SapurV1A.0552s0060 I 0.946
PRUPE_ppa016710mg Prunus persica PRUPE_ppa016710mg I 0.944
MDP0000241821 Malus domestica MDP0000241821 I 0.944
POPTR_0017s11830 Populus trichocarpa POPTR_0017s11830 I 0.943
MDP0000186765 Malus domestica MDP0000186765 I 0.943
BRADI3G37067 Brachypodium distachyon BRADI3G37067 I 0.942
GLYMA13G05350 Glycine max GLYMA13G05350 I 0.942
GLYMA19G02580 Glycine max GLYMA19G02580 I 0.942
POPTR_0004s12850 Populus trichocarpa POPTR_0004s12850 I 0.941
PRUPE_ppa022278mg Prunus persica PRUPE_ppa022278mg I 0.941
Pm006506 Prunus mume Pm006506 I 0.941
F775_23219 Aegilops tauschii F775_23219 I 0.939
Traes_2AS_C73DE621D Triticum aestivum Traes_2AS_C73DE621D I 0.939
Traes_2DS_8C3F6A558 Triticum aestivum Traes_2DS_8C3F6A558 I 0.939
Traes_2BS_2244C64CC Triticum aestivum Traes_2BS_2244C64CC I 0.938
Traes_5BL_2131D2B17 Triticum aestivum Traes_5BL_2131D2B17 I 0.938
Gorai.004G270400 Gossypium raimondii Gorai.004G270400 I 0.936
F775_22220 Aegilops tauschii F775_22220 I 0.935
Traes_2DS_E2F2E9EAF Triticum aestivum Traes_2DS_E2F2E9EAF I 0.935
Cucsa.265620 Cucumis sativus Cucsa.265620 I 0.931
cassava34069.m1 Manihot esculenta cassava34069.m1 I 0.930
SapurV1A.2065s0010 Salix purpurea SapurV1A.2065s0010 I 0.928
SapurV1A.2645s0010 Salix purpurea SapurV1A.2645s0010 I 0.928
chr2.LjT04L10.100.nc Lotus japonicus chr2.LjT04L10.100.nc I 0.926
GLYMA14G03441 Glycine max GLYMA14G03441 I 0.925
MLOC_60079 Hordeum vulgare MLOC_60079 I 0.925
GLYMA15G40950 Glycine max GLYMA15G40950 I 0.924
Gorai.001G091900 Gossypium raimondii Gorai.001G091900 I 0.924
Traes_5AL_F2A49EB8E Triticum aestivum Traes_5AL_F2A49EB8E I 0.923
TRIUR3_04556 Triticum urartu TRIUR3_04556 I 0.923
TRIUR3_04784 Triticum urartu TRIUR3_04784 I 0.923
cassava20477.m1 Manihot esculenta cassava20477.m1 I 0.923
Ciclev10005465m.g Citrus clementina Ciclev10005465m.g I 0.923
Ciclev10006695m.g Citrus clementina Ciclev10006695m.g I 0.923
Gorai.004G270300 Gossypium raimondii Gorai.004G270300 I 0.923
orange1.1g046948m.g Citrus sinensis orange1.1g046948m.g I 0.923
POPTR_0007s08340 Populus trichocarpa POPTR_0007s08340 I 0.922
Pm014764 Prunus mume Pm014764 I 0.922
mgf023960m Mimulus guttatus mgf023960m I 0.922
Gorai.009G357700 Gossypium raimondii Gorai.009G357700 I 0.922
Lus10030478.g Linum usitatissimum Lus10030478.g I 0.922
GLYMA02G45371 Glycine max GLYMA02G45371 I 0.921
Traes_2BS_3B6ABF5E6 Triticum aestivum Traes_2BS_3B6ABF5E6 I 0.921
TRIUR3_04557 Triticum urartu TRIUR3_04557 I 0.920
Ca_15236 Cicer arietinum Ca_15236 I 0.920
SapurV1A.0354s0230 Salix purpurea SapurV1A.0354s0230 I 0.920
Bo6g064260 Brassica oleracea Bo6g064260 I 0.919
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.918
Solyc02g069960.2 Solanum lycopersicum Solyc02g069960.2 I 0.918
30169.m006343 Ricinus communis 30169.m006343 I 0.918
Gorai.004G270200 Gossypium raimondii Gorai.004G270200 N 0.918
PK01104.1 Cannabis sativa PK01104.1 I 0.918
Aquca_026_00367 Aquilegia coerulea Aquca_026_00367 I 0.917
Gorai.012G054800 Gossypium raimondii Gorai.012G054800 I 0.917
PRUPE_ppa022043mg Prunus persica PRUPE_ppa022043mg I 0.916
Cla003401 Citrullus lanatus Cla003401 I 0.916
Cla005599 Citrullus lanatus Cla005599 I 0.916
PGSC0003DMG400021119 Solanum tuberosum PGSC0003DMG400021119 I 0.915
TCM_001955 Theobroma cacao TCM_001955 I 0.913
Ciclev10032203m.g Citrus clementina Ciclev10032203m.g I 0.911
orange1.1g021785m.g Citrus sinensis orange1.1g021785m.g I 0.911
Cucsa.118320 Cucumis sativus Cucsa.118320 I 0.910
JUB1 Arabidopsis thaliana AT2G43000 D 0.909
anac042 Arabidopsis lyrata fgenesh2_kg.4__2460__AT2G43000.1 I 0.909
Cla013684 Citrullus lanatus Cla013684 I 0.909
VIT_19s0027g00870 Vitis vinifera VIT_19s0027g00870 I 0.908
anac094 Arabidopsis lyrata Al_scaffold_0007_3733 I 0.907
Bo3g036290 Brassica oleracea Bo3g036290 I 0.907
Bra000282 Brassica rapa Bra000282 I 0.907
Bra028441 Brassica rapa Bra028441 I 0.907
POPTR_0005s22710 Populus trichocarpa POPTR_0005s22710 I 0.907
Bostr.10058s0013 Boechera stricta Bostr.10058s0013 I 0.907
Cagra.5905s0003 Capsella grandiflora Cagra.5905s0003 I 0.907
Carubv10006906m.g Capsella rubella Carubv10006906m.g I 0.907
Gorai.002G036700 Gossypium raimondii Gorai.002G036700 I 0.907
Thhalv10027860m.g Eutrema salsugineum Thhalv10027860m.g I 0.907
cassava21730.m1 Manihot esculenta cassava21730.m1 I 0.906
Bra004736 Brassica rapa Bra004736 I 0.905
anac042 Vitis vinifera VIT_12s0028g00860 I 0.905
chr3.CM0176.150.nc Lotus japonicus chr3.CM0176.150.nc I 0.905
Cagra.0202s0012 Capsella grandiflora Cagra.0202s0012 I 0.904
Carubv10023730m.g Capsella rubella Carubv10023730m.g I 0.904
ANAC094 Arabidopsis thaliana AT5G39820 D 0.903
POPTR_0002s05820 Populus trichocarpa POPTR_0002s05820 I 0.903
Lus10031189.g Linum usitatissimum Lus10031189.g I 0.903
Lus10031767.g Linum usitatissimum Lus10031767.g I 0.903
PDK_20s1311871g001 Phoenix dactylifera PDK_20s1311871g001 I 0.903
Bo4g192870 Brassica oleracea Bo4g192870 I 0.902
Bra037743 Brassica rapa Bra037743 I 0.902
TRIUR3_04558 Triticum urartu TRIUR3_04558 N 0.901
LPERR03G30390 Leersia perrieri LPERR03G30390 I 0.900
TCM_032393 Theobroma cacao TCM_032393 I 0.900
mgf019629m Mimulus guttatus mgf019629m N 0.899
GRMZM2G112548 Zea mays GRMZM2G112548 I 0.898
Thhalv10017054m.g Eutrema salsugineum Thhalv10017054m.g I 0.896
OBART03G36060 Oryza barthii OBART03G36060 I 0.895
OGLUM03G35790 Oryza glumaepatula OGLUM03G35790 I 0.895
OMERI03G33230 Oryza meridionalis OMERI03G33230 I 0.895
OPUNC03G33030 Oryza punctata OPUNC03G33030 I 0.895
ORGLA03G0330500 Oryza glaberrima ORGLA03G0330500 I 0.895
POPTR_0005s10080 Populus trichocarpa POPTR_0005s10080 I 0.895
VIT_19s0027g00860 Vitis vinifera VIT_19s0027g00860 I 0.895
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I 0.895
SELMODRAFT_15487 Selaginella moellendorffii SELMODRAFT_15487 N 0.893
SELMODRAFT_25673 Selaginella moellendorffii SELMODRAFT_25673 N 0.893
GSMUA_Achr5G02170_001 Musa acuminata GSMUA_Achr5G02170_001 I 0.892
Si036447m.g Setaria italica Si036447m.g I 0.892
VIT_19s0027g00880 Vitis vinifera VIT_19s0027g00880 I 0.892
F775_01324 Aegilops tauschii F775_01324 I 0.891
Sb01g006410 Sorghum bicolor Sb01g006410 I 0.891
Bostr.25993s0479 Boechera stricta Bostr.25993s0479 I 0.891
Cla023594 Citrullus lanatus Cla023594 I 0.889
Solyc07g045030.2 Solanum lycopersicum Solyc07g045030.2 I 0.888
BGIOSGA013656 Oryza indica BGIOSGA013656 I 0.887
ONIVA10G12510 Oryza nivara ONIVA10G12510 I 0.887
ORUFI03G37500 Oryza rufipogon ORUFI03G37500 I 0.887
OS03G0777000 Oryza sativa OS03G0777000 I 0.887
Eucgr.K01228 Eucalyptus grandis Eucgr.K01228 I 0.885
Pavir.J03639 Panicum virgatum Pavir.J03639 I 0.885
Pavir.J26531 Panicum virgatum Pavir.J26531 I 0.885
Pm011037 Prunus mume Pm011037 I 0.884
SapurV1A.0085s0430 Salix purpurea SapurV1A.0085s0430 I 0.883
BRADI1G06970 Brachypodium distachyon BRADI1G06970 I 0.882
Traes_5BL_3900B9128 Triticum aestivum Traes_5BL_3900B9128 I 0.882
PRUPE_ppa026843mg Prunus persica PRUPE_ppa026843mg I 0.881
MLOC_4952 Hordeum vulgare MLOC_4952 N 0.880
MLOC_66348 Hordeum vulgare MLOC_66348 N 0.880
F775_15555 Aegilops tauschii F775_15555 N 0.879
F775_18203 Aegilops tauschii F775_18203 I 0.879
Traes_5DL_0924913F8 Triticum aestivum Traes_5DL_0924913F8 I 0.879
POPTR_0001s11660 Populus trichocarpa POPTR_0001s11660 I 0.877
Sb02g002620 Sorghum bicolor Sb02g002620 N 0.877
Traes_5BL_39FF03C5D Triticum aestivum Traes_5BL_39FF03C5D I 0.877
SapurV1A.0094s0540 Salix purpurea SapurV1A.0094s0540 I 0.877
TRIUR3_23954 Triticum urartu TRIUR3_23954 N 0.876
GRMZM2G479980 Zea mays GRMZM2G479980 N 0.875
Traes_5BL_57ABE6426 Triticum aestivum Traes_5BL_57ABE6426 I 0.875
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.874
MDP0000428265 Malus domestica MDP0000428265 I 0.873
MTR_5g090970 Medicago truncatula MTR_5g090970 I 0.872
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I 0.872
Traes_4BL_F1BECD544 Triticum aestivum Traes_4BL_F1BECD544 N 0.871
TRIUR3_28933 Triticum urartu TRIUR3_28933 N 0.871