CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb05g003400
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb05g003400
T295551_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb05g003400.1
NAC/NAM
25
161
APGFRFYPTEEELLTFYLRHRLAGTRPVVEHLIPVVDIYSYHPSELRAMAGAASVSDPEQWFFFCPRAERELHGGRPARTTPSGYWKATGSPSYVYSSSSSPTANNRVIGEKRTMVFYQGRAPTGNKTPWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
123 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla003087
Citrullus lanatus
Cla003087
I
0.921
Cucsa.319840
Cucumis sativus
Cucsa.319840
I
0.935
AMTR_s00040p00117430
Amborella trichopoda
AMTR_s00040p00117430
N
0.903
BGIOSGA004848
Oryza indica
BGIOSGA004848
N
0.912
BGIOSGA034823
Oryza indica
BGIOSGA034823
N
0.975
BGIOSGA037019
Oryza indica
BGIOSGA037019
N
0.955
BRADI2G55780
Brachypodium distachyon
BRADI2G55780
N
0.877
F775_13455
Aegilops tauschii
F775_13455
N
0.949
F775_19761
Aegilops tauschii
F775_19761
N
0.886
GLYMA03G35570
Glycine max
GLYMA03G35570
N
0.946
GLYMA12G09670
Glycine max
GLYMA12G09670
N
0.883
GLYMA12G31150
Glycine max
GLYMA12G31150
N
0.914
GLYMA13G39160
Glycine max
GLYMA13G39160
N
0.913
GLYMA19G38211
Glycine max
GLYMA19G38211
N
0.947
GRMZM2G439903
Zea mays
GRMZM2G439903
N
0.992
GRMZM5G832473
Zea mays
GRMZM5G832473
N
0.901
GSMUA_Achr10G04720_001
Musa acuminata
GSMUA_Achr10G04720_001
N
0.935
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
0.930
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.923
LPERR01G32790
Leersia perrieri
LPERR01G32790
N
0.905
LPERR11G02950
Leersia perrieri
LPERR11G02950
N
0.942
LPERR12G03220
Leersia perrieri
LPERR12G03220
N
0.946
MLOC_60153
Hordeum vulgare
MLOC_60153
N
0.954
MTR_2g086690
Medicago truncatula
MTR_2g086690
N
0.894
MTR_4g052620
Medicago truncatula
MTR_4g052620
N
0.904
MTR_7g105170
Medicago truncatula
MTR_7g105170
N
0.904
OB11G12830
Oryza brachyantha
OB11G12830
N
0.980
OB12G13350
Oryza brachyantha
OB12G13350
N
0.964
OBART01G38190
Oryza barthii
OBART01G38190
N
0.912
OBART11G03530
Oryza barthii
OBART11G03530
N
0.974
OBART12G03440
Oryza barthii
OBART12G03440
N
0.957
OGLUM01G42380
Oryza glumaepatula
OGLUM01G42380
N
0.912
OGLUM11G03170
Oryza glumaepatula
OGLUM11G03170
N
0.975
OGLUM12G04110
Oryza glumaepatula
OGLUM12G04110
N
0.957
OMERI01G35090
Oryza meridionalis
OMERI01G35090
N
0.912
OMERI11G03230
Oryza meridionalis
OMERI11G03230
N
0.975
ONIVA01G42870
Oryza nivara
ONIVA01G42870
N
0.912
ONIVA11G03690
Oryza nivara
ONIVA11G03690
N
0.975
ONIVA12G03060
Oryza nivara
ONIVA12G03060
N
0.955
OPUNC01G36980
Oryza punctata
OPUNC01G36980
N
0.912
OPUNC11G03220
Oryza punctata
OPUNC11G03220
N
0.975
OPUNC12G03240
Oryza punctata
OPUNC12G03240
N
0.959
ORGLA01G0320200
Oryza glaberrima
ORGLA01G0320200
N
0.912
ORGLA11G0032800
Oryza glaberrima
ORGLA11G0032800
N
0.975
ORGLA12G0033100
Oryza glaberrima
ORGLA12G0033100
N
0.955
ORGLA12G0180300
Oryza glaberrima
ORGLA12G0180300
N
0.975
ORUFI01G41540
Oryza rufipogon
ORUFI01G41540
N
0.912
ORUFI11G03420
Oryza rufipogon
ORUFI11G03420
N
0.975
OS01G0862800
Oryza sativa
OS01G0862800
N
0.912
OS11G0154500
Oryza sativa
OS11G0154500
N
0.975
OS12G0156100
Oryza sativa
OS12G0156100
N
0.955
PGSC0003DMG400026332
Solanum tuberosum
PGSC0003DMG400026332
N
0.962
POPTR_0009s02430
Populus trichocarpa
POPTR_0009s02430
N
0.899
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
0.944
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.940
Si002586m.g
Setaria italica
Si002586m.g
N
0.932
Si025833m.g
Setaria italica
Si025833m.g
N
0.981
Si026707m.g
Setaria italica
Si026707m.g
N
0.989
Solyc09g010160.1
Solanum lycopersicum
Solyc09g010160.1
N
0.897
Solyc11g068620.1
Solanum lycopersicum
Solyc11g068620.1
N
0.961
TCM_041364
Theobroma cacao
TCM_041364
N
0.945
TRAES3BF019300010CFD_g
Triticum aestivum
TRAES3BF019300010CFD_g
N
0.885
Traes_5DL_43FC1B296
Triticum aestivum
Traes_5DL_43FC1B296
N
0.949
TRIUR3_33275
Triticum urartu
TRIUR3_33275
N
0.938
TRIUR3_34272
Triticum urartu
TRIUR3_34272
N
0.874
Ca_00818
Cicer arietinum
Ca_00818
N
0.894
Ca_15160
Cicer arietinum
Ca_15160
N
0.876
Cla008777
Citrullus lanatus
Cla008777
N
0.911
Cla018691
Citrullus lanatus
Cla018691
N
0.926
Pm001403
Prunus mume
Pm001403
N
0.940
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
0.935
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.950
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.955
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
0.890
cassava3989.m1
Manihot esculenta
cassava3989.m1
N
0.945
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.914
Cucsa.185760
Cucumis sativus
Cucsa.185760
N
0.912
mgf020234m
Mimulus guttatus
mgf020234m
N
0.933
mgf024293m
Mimulus guttatus
mgf024293m
N
0.905
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.955
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.940
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.940
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.945
Eucgr.A02637
Eucalyptus grandis
Eucgr.A02637
N
0.906
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
0.939
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
0.944
Eucgr.C02446
Eucalyptus grandis
Eucgr.C02446
N
0.889
Eucgr.I00587
Eucalyptus grandis
Eucgr.I00587
N
0.885
Eucgr.J00505
Eucalyptus grandis
Eucgr.J00505
N
0.889
Eucgr.J00508
Eucalyptus grandis
Eucgr.J00508
N
0.889
Eucgr.J00511
Eucalyptus grandis
Eucgr.J00511
N
0.882
Eucgr.J00512
Eucalyptus grandis
Eucgr.J00512
N
0.889
Eucgr.J00513
Eucalyptus grandis
Eucgr.J00513
N
0.887
Eucgr.J00514
Eucalyptus grandis
Eucgr.J00514
N
0.882
Eucgr.J00516
Eucalyptus grandis
Eucgr.J00516
N
0.873
Eucgr.J00517
Eucalyptus grandis
Eucgr.J00517
N
0.914
Eucgr.J00518
Eucalyptus grandis
Eucgr.J00518
N
0.915
Eucgr.J00519
Eucalyptus grandis
Eucgr.J00519
N
0.879
Eucgr.J00520
Eucalyptus grandis
Eucgr.J00520
N
0.901
evm.TU.supercontig_104.98
Carica papaya
evm.TU.supercontig_104.98
N
0.906
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.950
gene15644-v1.0-hybrid
Fragaria vesca
gene15644-v1.0-hybrid
N
0.874
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
0.914
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.929
Lus10004846.g
Linum usitatissimum
Lus10004846.g
N
0.909
Lus10020643.g
Linum usitatissimum
Lus10020643.g
N
0.909
Lus10029410.g
Linum usitatissimum
Lus10029410.g
N
0.925
MDP0000130797
Malus domestica
MDP0000130797
N
0.938
MDP0000205938
Malus domestica
MDP0000205938
N
0.930
MDP0000759504
Malus domestica
MDP0000759504
N
0.938
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.939
Pavir.Bb01366
Panicum virgatum
Pavir.Bb01366
N
0.984
Pavir.Ea03745
Panicum virgatum
Pavir.Ea03745
N
0.931
Pavir.Ha01768
Panicum virgatum
Pavir.Ha01768
N
0.983
Pavir.Hb01808
Panicum virgatum
Pavir.Hb01808
N
0.992
Pavir.J02276
Panicum virgatum
Pavir.J02276
N
0.906
Pavir.J13106
Panicum virgatum
Pavir.J13106
N
0.988
SapurV1A.0630s0010
Salix purpurea
SapurV1A.0630s0010
N
0.943
SapurV1A.0974s0010
Salix purpurea
SapurV1A.0974s0010
N
0.945
SapurV1A.3648s0010
Salix purpurea
SapurV1A.3648s0010
N
0.884
PK27925.1
Cannabis sativa
PK27925.1
N
0.943
PK29014.1
Cannabis sativa
PK29014.1
N
0.944
LjSGA_014778.2
Lotus japonicus
LjSGA_014778.2
N
0.894