Solyc05g055480.2 (Solanum lycopersicum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Solyc05g055480.2 T295856_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.905 0.763
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.905 0.763
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc05g055480.2.1 NAC/NAM 18 144

Links

Other NAC/NAM family TFs
Other Solanum lycopersicum TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC050 Arabidopsis thaliana AT3G10480 D 0.905
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.894
mgf020265m Mimulus guttatus mgf020265m I 0.925
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.905
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.905
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I 0.901
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.905
Carubv10013564m.g Capsella rubella Carubv10013564m.g I 0.901
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.905
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I 0.909
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.899
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.898
Lus10023537.g Linum usitatissimum Lus10023537.g I 0.882
Lus10037939.g Linum usitatissimum Lus10037939.g I 0.900
Lus10038670.g Linum usitatissimum Lus10038670.g I 0.900
MDP0000437676 Malus domestica MDP0000437676 I 0.878
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I 0.909
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.910
Thhalv10020717m.g Eutrema salsugineum Thhalv10020717m.g I 0.901
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I 0.901
PK06477.1 Cannabis sativa PK06477.1 I 0.896
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.889
PGSC0003DMG401023373 Solanum tuberosum PGSC0003DMG401023373 I 0.971
Bo5g137360 Brassica oleracea Bo5g137360 I 0.875
Bra029844 Brassica rapa Bra029844 I 0.875
Bra034119 Brassica rapa Bra034119 I 0.883
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.905
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.905
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.890
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.890
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.887
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I 0.897
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.911
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I 0.874
Bo1g143840 Brassica oleracea Bo1g143840 I 0.883
TCM_043357 Theobroma cacao TCM_043357 I 0.898
VIT_13s0019g05230 Vitis vinifera VIT_13s0019g05230 I 0.886
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I 0.877
Ca_08371 Cicer arietinum Ca_08371 I 0.891
Cla020838 Citrullus lanatus Cla020838 I 0.901
ANAC052 Arabidopsis thaliana AT3G10490 I 0.874
PGSC0003DMG400031072 Solanum tuberosum PGSC0003DMG400031072 N 0.912
Solyc11g008010.1 Solanum lycopersicum Solyc11g008010.1 N 0.917
mgf012700m Mimulus guttatus mgf012700m N 0.928