CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc12g056790.1
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc12g056790.1
T295908_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC13
M07170_2.00
Arabidopsis thaliana
TDNCTTGYYNNNCAAG
CTTGNNNRRCAAGNHA
Dap-seq
OMalley et al.(2016)
ANAC013_col_a
0.876
0.667
ANAC13
M07171_2.00
Arabidopsis thaliana
CTTGYBHNNCAAGNHAH
DTDNCTTGNNDVRCAAG
Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a
0.876
0.667
ANAC13
M11077_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC013_Q2
0.876
0.667
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc12g056790.1.1
NAC/NAM
23
149
PPGFRFHPTDEELVLYYLKKKICGKRILLDAIAETDVYKWEPEDLPDLSKLKTGDRQWFFFSPRDRKYPNGARANRGTKRGHWKVTGKDRIIMCNSRAVGLKKTLVFYKGRAPVGERTDWVMHEYTM
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Foxn4
Mus musculus
ENSMUSG00000042002
D
jumu
Drosophila melanogaster
FBgn0015396
D
CpipJ_CPIJ001711
Culex pipiens
CpipJ_CPIJ001711
I
AAEL018187
Aedes aegypti
AAEL018187
I
ACYPI21591
Acyrthosiphon pisum
ACYPI21591
I
AGAP003940
Anopheles gambiae
AGAP003940
I
Aqu1.221965
Amphimedon queenslandica
Aqu1.221965
I
BGIBMGA000445
Bombyx mori
BGIBMGA000445
I
CPIJ001711
Culex quinquefasciatus
CPIJ001711
I
ENSACAG00000011719
Anolis carolinensis
ENSACAG00000011719
I
ENSAMEG00000016548
Ailuropoda melanoleuca
ENSAMEG00000016548
I
ENSAMXG00000006838
Astyanax mexicanus
ENSAMXG00000006838
I
ENSAMXG00000017753
Astyanax mexicanus
ENSAMXG00000017753
I
ENSAPLG00000002586
Anas platyrhynchos
ENSAPLG00000002586
I
FOXN4
Bos taurus
ENSBTAG00000010847
I
FOXN4
Canis familiaris
ENSCAFG00000010915
I
FOXN4
Cavia porcellus
ENSCPOG00000000942
I
ENSCSAG00000002781
Chlorocebus sabaeus
ENSCSAG00000002781
I
foxn4
Danio rerio
ENSDARG00000010591
I
foxn1
Danio rerio
ENSDARG00000011879
I
FOXN4
Dasypus novemcinctus
ENSDNOG00000015606
I
ENSFALG00000008767
Ficedula albicollis
ENSFALG00000008767
I
FOXN4
Felis catus
ENSFCAG00000003124
I
FOXN4
Homo sapiens
ENSG00000139445
I
foxn1
Gasterosteus aculeatus
ENSGACG00000008619
I
foxn4
Gasterosteus aculeatus
ENSGACG00000009215
I
FoxN4
Gallus gallus
ENSGALG00000005062
I
FOXN4
Gorilla gorilla
ENSGGOG00000009323
I
ENSGMOG00000002294
Gadus morhua
ENSGMOG00000002294
I
ENSGMOG00000012022
Gadus morhua
ENSGMOG00000012022
I
ENSLACG00000011453
Latimeria chalumnae
ENSLACG00000011453
I
ENSLOCG00000000236
Lepisosteus oculatus
ENSLOCG00000000236
I
ENSLOCG00000004428
Lepisosteus oculatus
ENSLOCG00000004428
I
ENSMEUG00000015975
Macropus eugenii
ENSMEUG00000015975
I
FOXN4
Meleagris gallopavo
ENSMGAG00000006116
I
ENSMMUG00000020375
Macaca mulatta
ENSMMUG00000020375
I
ENSMPUG00000003606
Mustela putorius furo
ENSMPUG00000003606
I
ENSNLEG00000001602
Nomascus leucogenys
ENSNLEG00000001602
I
FOXN4
Ornithorhynchus anatinus
ENSOANG00000008810
I
ENSOARG00000016041
Ovis aries
ENSOARG00000016041
I
FOXN4
Oryctolagus cuniculus
ENSOCUG00000005185
I
FOXN4
Otolemur garnettii
ENSOGAG00000007455
I
ENSONIG00000008179
Oreochromis niloticus
ENSONIG00000008179
I
ENSONIG00000013504
Oreochromis niloticus
ENSONIG00000013504
I
FOXN4
Ochotona princeps
ENSOPRG00000006537
I
FOXN4
Oryzias latipes
ENSORLG00000007587
I
ENSORLG00000008113
Oryzias latipes
ENSORLG00000008113
I
ENSPANG00000019523
Papio anubis
ENSPANG00000019523
I
ENSPFOG00000006570
Poecilia formosa
ENSPFOG00000006570
I
ENSPFOG00000013538
Poecilia formosa
ENSPFOG00000013538
I
ENSPMAG00000004307
Petromyzon marinus
ENSPMAG00000004307
I
ENSPPYG00000004931
Pongo abelii
ENSPPYG00000004931
I
ENSPSIG00000004744
Pelodiscus sinensis
ENSPSIG00000004744
I
ENSPSIG00000009226
Pelodiscus sinensis
ENSPSIG00000009226
I
FOXN4
Pan troglodytes
ENSPTRG00000005421
I
FOXN4
Pteropus vampyrus
ENSPVAG00000007463
I
Foxn4
Rattus norvegicus
ENSRNOG00000000691
I
ENSSSCG00000009936
Sus scrofa
ENSSSCG00000009936
I
ENSSTOG00000028800
Ictidomys tridecemlineatus
ENSSTOG00000028800
I
FOXN4
Tupaia belangeri
ENSTBEG00000005233
I
FOXN4
Taeniopygia guttata
ENSTGUG00000007235
I
foxn4
Tetraodon nigroviridis
ENSTNIG00000015894
I
foxn4
Takifugu rubripes
ENSTRUG00000015456
I
FOXN4
Tursiops truncatus
ENSTTRG00000006397
I
ENSXMAG00000007879
Xiphophorus maculatus
ENSXMAG00000007879
I
ENSXMAG00000011786
Xiphophorus maculatus
ENSXMAG00000011786
I
GA17887
Drosophila pseudoobscura
FBgn0077896
I
GF17528
Drosophila ananassae
FBgn0094546
I
GG17529
Drosophila erecta
FBgn0109754
I
GH19127
Drosophila grimshawi
FBgn0126594
I
GI23584
Drosophila mojavensis
FBgn0146310
I
GM23879
Drosophila sechellia
FBgn0178744
I
GD18690
Drosophila simulans
FBgn0190211
I
GJ23559
Drosophila virilis
FBgn0210656
I
GK11545
Drosophila willistoni
FBgn0213556
I
GE26032
Drosophila yakuba
FBgn0243075
I
GB41890
Apis mellifera
GB41890
I
ISCW008179
Ixodes scapularis
ISCW008179
I
KGM_21935
Danaus plexippus
KGM_21935
I
L798_10143
Zootermopsis nevadensis
L798_10143
I
LotgiG77849
Lottia gigantea
LotgiG77849
I
NEMVEDRAFT_v1g121754
Nematostella vectensis
NEMVEDRAFT_v1g121754
I
PHUM047550
Pediculus humanus
PHUM047550
I
RPRC003475
Rhodnius prolixus
RPRC003475
I
SINV24088
Solenopsis invicta
SINV24088
I
SMAR013946
Strigamia maritima
SMAR013946
I
TC012532
Tribolium castaneum
TC012532
I
YQE_08440
Dendroctonus ponderosae
YQE_08440
I
Aan_R010366
Calypte anna
Aan_R010366
I
Afo_R000794
Aptenodytes forsteri
Afo_R000794
I
Alligator_sinensis_CCG016523.1
Alligator sinensis
Alligator_sinensis_CCG016523.1
I
Brh_R003679
Buceros rhinoceros
Brh_R003679
I
Cflo_09362--XP_394749.3_APIME
Camponotus floridanus
Cflo_09362--XP_394749.3_APIME
I
Cmyd_10015695
Chelonia mydas
Cmyd_10015695
I
ENSBTAP00000014397-D1
Bos grunniens
ENSBTAP00000014397-D1
I
ENSP00000299162
Macaca fascicularis
ENSP00000299162
I
Gfo_R003176
Geospiza fortis
Gfo_R003176
I
Ogr14394
Ophisaurus gracilis
Ogr14394
I
Pvit_02436
Pogona vitticeps
Pvit_02436
I
Tal_R000657
Tyto alba
Tal_R000657
I
estExt_fgenesh2_pg.C_1860025
Branchiostoma floridae
estExt_fgenesh2_pg.C_1860025
I
fgenesh2_pg.scaffold_129000050
Branchiostoma floridae
fgenesh2_pg.scaffold_129000050
I
Sakowv30034418m.g
Saccoglossus kowalevskii
Sakowv30034418m.g
I
CLEC011741
Cimex lectularius
CLEC011741
I
HHAL008872-PA
Halyomorpha halys
HHAL008872-PA
I
LCUP000947
Lucilia cuprina
LCUP000947
I
LDEC004155
Leptinotarsa decemlineata
LDEC004155
I
foxn4
Xenopus tropicalis
XB-GENE-981086
I
foxn4.S
Xenopus laevis
XB-GENE-981090
I
XP_002166457.1
Hydra magnipapillata
XP_002166457.1
I
AALB009566
Anopheles albimanus
AALB009566
I
AARA009846
Anopheles arabiensis
AARA009846
I
AATE005421
Anopheles atroparvus
AATE005421
I
ACUA002164
Anopheles culicifacies
ACUA002164
I
ADIR003350
Anopheles dirus
ADIR003350
I
AEPI007299
Anopheles epiroticus
AEPI007299
I
AFAF001586
Anopheles farauti
AFAF001586
I
AFUN011236
Anopheles funestus
AFUN011236
I
AMAM019487
Anopheles maculatus
AMAM019487
I
AMIN000296
Anopheles minimus
AMIN000296
I
AQUA009136
Anopheles quadriannulatus
AQUA009136
I
ASIS014250
Anopheles sinensis
ASIS014250
I
ASTEI00952
Anopheles stephensi
ASTEI00952
I
LLOJ002533
Lutzomyia longipalpis
LLOJ002533
I
MDOA003678
Musca domestica
MDOA003678
I
PPAI007934
Phlebotomus papatasi
PPAI007934
I