Solyc12g056790.1 (Solanum lycopersicum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Solyc12g056790.1 T295908_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC13
M07170_2.00 		Arabidopsis thaliana
TDNCTTGYYNNNCAAG
CTTGNNNRRCAAGNHA		 Dap-seq
OMalley et al.(2016)
ANAC013_col_a 		0.876 0.667
ANAC13
M07171_2.00 		Arabidopsis thaliana
CTTGYBHNNCAAGNHAH
DTDNCTTGNNDVRCAAG		 Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a 		0.876 0.667
ANAC13
M11077_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC013_Q2 		0.876 0.667
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc12g056790.1.1 NAC/NAM 23 149

Links

Other NAC/NAM family TFs
Other Solanum lycopersicum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400031149 Solanum tuberosum PGSC0003DMG400031149 I 0.955
Solyc04g072220.2 Solanum lycopersicum Solyc04g072220.2 I 0.953
PGSC0003DMG400016962 Solanum tuberosum PGSC0003DMG400016962 N 0.939
mg018130m Mimulus guttatus mg018130m I 0.931
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I 0.903
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I 0.902
SapurV1A.0348s0040 Salix purpurea SapurV1A.0348s0040 I 0.902
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.900
mgf015836m Mimulus guttatus mgf015836m I 0.900
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I 0.899
MDP0000146969 Malus domestica MDP0000146969 I 0.893
MDP0000169485 Malus domestica MDP0000169485 I 0.893
Cla013854 Citrullus lanatus Cla013854 I 0.892
Thhalv10007369m.g Eutrema salsugineum Thhalv10007369m.g I 0.889
Cucsa.364130 Cucumis sativus Cucsa.364130 N 0.888
Bostr.3359s0074 Boechera stricta Bostr.3359s0074 I 0.881
ANAC13 Arabidopsis lyrata fgenesh2_kg.1__3425__AT1G32870.2 I 0.880
Cagra.1443s0015 Capsella grandiflora Cagra.1443s0015 I 0.878
ANAC13 Arabidopsis thaliana AT1G32870 D 0.876
Carubv10008817m.g Capsella rubella Carubv10008817m.g I 0.876
gene27539-v1.0-hybrid Fragaria vesca gene27539-v1.0-hybrid N 0.873
PRUPE_ppa003410mg Prunus persica PRUPE_ppa003410mg N 0.872
TCM_036587 Theobroma cacao TCM_036587 I 0.872
Pm022358 Prunus mume Pm022358 N 0.872
Gorai.009G260000 Gossypium raimondii Gorai.009G260000 I 0.871