VIT_13s0019g05230 (Vitis vinifera)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 VIT_13s0019g05230 T296414_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.911 0.754
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.911 0.754
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_13s0019g05230.t01 NAC/NAM 14 140

Links

Other NAC/NAM family TFs
Other Vitis vinifera TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC050 Arabidopsis thaliana AT3G10480 D 0.917
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.916
Pm017547 Prunus mume Pm017547 I 0.899
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I 0.919
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.923
mgf000623m Mimulus guttatus mgf000623m I 0.883
mgf004743m Mimulus guttatus mgf004743m I 0.891
mgf020265m Mimulus guttatus mgf020265m I 0.875
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.911
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.911
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I 0.907
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.911
Carubv10013564m.g Capsella rubella Carubv10013564m.g I 0.907
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.911
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I 0.890
Eucgr.J01038 Eucalyptus grandis Eucgr.J01038 I 0.905
Cla020838 Citrullus lanatus Cla020838 I 0.924
Gorai.011G234200 Gossypium raimondii Gorai.011G234200 I 0.883
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.906
Lus10023537.g Linum usitatissimum Lus10023537.g I 0.914
Lus10037939.g Linum usitatissimum Lus10037939.g I 0.917
Lus10038670.g Linum usitatissimum Lus10038670.g I 0.917
MDP0000258167 Malus domestica MDP0000258167 I 0.893
MDP0000437676 Malus domestica MDP0000437676 I 0.906
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I 0.890
Pavir.Fa00048 Panicum virgatum Pavir.Fa00048 I 0.896
Pavir.Fb02407 Panicum virgatum Pavir.Fb02407 I 0.896
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.904
Thhalv10020717m.g Eutrema salsugineum Thhalv10020717m.g I 0.907
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I 0.907
PK06477.1 Cannabis sativa PK06477.1 I 0.909
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.924
OB08G30590 Oryza brachyantha OB08G30590 I 0.889
ANAC052 Arabidopsis thaliana AT3G10490 I 0.895
Bo1g143840 Brassica oleracea Bo1g143840 I 0.893
Bo1g143850 Brassica oleracea Bo1g143850 I 0.878
Bo5g137360 Brassica oleracea Bo5g137360 I 0.882
Bra029844 Brassica rapa Bra029844 I 0.882
Bra034118 Brassica rapa Bra034118 I 0.878
Bra034119 Brassica rapa Bra034119 I 0.893
BRADI3G12470 Brachypodium distachyon BRADI3G12470 I 0.876
F775_27564 Aegilops tauschii F775_27564 I 0.893
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.911
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.911
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.924
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.924
LPERR08G20450 Leersia perrieri LPERR08G20450 I 0.888
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.925
Ca_08371 Cicer arietinum Ca_08371 I 0.925
PGSC0003DMG401023373 Solanum tuberosum PGSC0003DMG401023373 I 0.872
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I 0.913
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.909
Sb07g023900 Sorghum bicolor Sb07g023900 I 0.895
Si013361m.g Setaria italica Si013361m.g I 0.896
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I 0.917
Solyc05g055480.2 Solanum lycopersicum Solyc05g055480.2 I 0.886
Solyc11g008000.1 Solanum lycopersicum Solyc11g008000.1 I 0.880
TCM_043357 Theobroma cacao TCM_043357 I 0.913
Traes_7BL_FB5FAC1E8 Triticum aestivum Traes_7BL_FB5FAC1E8 I 0.893
Traes_7DS_9FBF54244 Triticum aestivum Traes_7DS_9FBF54244 I 0.893
TRIUR3_33524 Triticum urartu TRIUR3_33524 I 0.893
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I 0.910
PGSC0003DMG400031071 Solanum tuberosum PGSC0003DMG400031071 N 0.876
Eucgr.G02740 Eucalyptus grandis Eucgr.G02740 N 0.900