CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
cassava5602.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava5602.m1
T296936_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava5602.m1
NAC/NAM
15
137
PVGYRFHPTDEELLLHYLRRKVFGVPLPASVIPELDVFQADPWSLPGDLKEKRYFFSRKWGNDSENRCKRAAGSGYWKPIGKGRQIVASISNHLIGIKKSLIFCEGKNSNDSTTQWIMHEYHL
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G335814
Zea mays
GRMZM2G335814
N
Sb01g015165
Sorghum bicolor
Sb01g015165
N
Sb01g015170
Sorghum bicolor
Sb01g015170
N
Sb01g015180
Sorghum bicolor
Sb01g015180
N
Si039877m.g
Setaria italica
Si039877m.g
N
Si040221m.g
Setaria italica
Si040221m.g
N
Pavir.Ia01446
Panicum virgatum
Pavir.Ia01446
N
Pavir.Ib03899
Panicum virgatum
Pavir.Ib03899
N
Pavir.Ib03902
Panicum virgatum
Pavir.Ib03902
N