CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.087480
(
Cucumis sativus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cucsa.087480
T296957_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.087480.1
NAC/NAM
10
155
PAGVKFDPTDQELLQHLEGKVGCDTHKLLLHPLIDEFIPTIQWEHGICYTHPQKLPGVRKDGLVRHFFHRPSKAYTTGTRKRRKVHADADDARGEGETRWHKTGKTRPVIVGGRVKGYKKILVLYTNYGKQKKPEKTNWIMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Cucumis sativus
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_66537
Hordeum vulgare
MLOC_66537
I
0.872
Sb10g022130
Sorghum bicolor
Sb10g022130
N
0.988
Sb03g031000
Sorghum bicolor
Sb03g031000
N
0.887
Si006435m.g
Setaria italica
Si006435m.g
N
0.988
Si014408m.g
Setaria italica
Si014408m.g
N
0.893
Si030942m.g
Setaria italica
Si030942m.g
N
0.924
Traes_5BL_456C3408A
Triticum aestivum
Traes_5BL_456C3408A
N
0.899
Traes_5DL_36AE1EF2B
Triticum aestivum
Traes_5DL_36AE1EF2B
N
0.883
Traes_7AL_EFD897AFC
Triticum aestivum
Traes_7AL_EFD897AFC
N
0.973
Traes_7DL_1913741A8
Triticum aestivum
Traes_7DL_1913741A8
N
0.976
Ca_22941
Cicer arietinum
Ca_22941
N
0.882
Cla000384
Citrullus lanatus
Cla000384
N
0.998
mgf019352m
Mimulus guttatus
mgf019352m
N
0.992
Aquca_003_00875
Aquilegia coerulea
Aquca_003_00875
N
0.885
Lus10012927.g
Linum usitatissimum
Lus10012927.g
N
0.992
Lus10034999.g
Linum usitatissimum
Lus10034999.g
N
0.992
Pavir.Da00789
Panicum virgatum
Pavir.Da00789
N
0.988
Pavir.Db01277
Panicum virgatum
Pavir.Db01277
N
0.989
Pavir.J04931
Panicum virgatum
Pavir.J04931
N
0.891
Pavir.J11699
Panicum virgatum
Pavir.J11699
N
0.935
Pavir.J23083
Panicum virgatum
Pavir.J23083
N
0.935
MLOC_72553
Hordeum vulgare
MLOC_72553
N
0.990
Bo9g126190
Brassica oleracea
Bo9g126190
N
0.985
Bra002802
Brassica rapa
Bra002802
N
0.985
BRADI4G34800
Brachypodium distachyon
BRADI4G34800
N
0.940
GRMZM2G054277
Zea mays
GRMZM2G054277
N
0.904
GRMZM2G100583
Zea mays
GRMZM2G100583
N
0.877
GRMZM2G115721
Zea mays
GRMZM2G115721
N
0.989
GRMZM2G179049
Zea mays
GRMZM2G179049
N
0.914
LPERR09G12100
Leersia perrieri
LPERR09G12100
N
0.896
MLOC_55957
Hordeum vulgare
MLOC_55957
N
0.899
BGIOSGA031062
Oryza indica
BGIOSGA031062
N
0.915
OBART09G15890
Oryza barthii
OBART09G15890
N
0.915
OGLUM09G16460
Oryza glumaepatula
OGLUM09G16460
N
0.915
OMERI09G11810
Oryza meridionalis
OMERI09G11810
N
0.901
ONIVA09G17010
Oryza nivara
ONIVA09G17010
N
0.915
OPUNC09G14320
Oryza punctata
OPUNC09G14320
N
0.877
ORGLA09G0123200
Oryza glaberrima
ORGLA09G0123200
N
0.915
ORUFI09G17170
Oryza rufipogon
ORUFI09G17170
N
0.922
OS09G0509100
Oryza sativa
OS09G0509100
N
0.922