Gorai.011G234200 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.011G234200 T298163_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.924 0.842
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.924 0.842
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G234200.1 NAC/NAM 33 159

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC050 Arabidopsis thaliana AT3G10480 D 0.938
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.924
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I 0.926
Carubv10013564m.g Capsella rubella Carubv10013564m.g I 0.923
Cagra.9217s0020 Capsella grandiflora Cagra.9217s0020 I 0.872
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.924
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I 0.923
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.924
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.924
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.900
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I 0.943
Pm017547 Prunus mume Pm017547 I 0.901
Cla020838 Citrullus lanatus Cla020838 I 0.902
Ca_08371 Cicer arietinum Ca_08371 I 0.903
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I 0.882
VIT_13s0019g05230 Vitis vinifera VIT_13s0019g05230 I 0.883
TRIUR3_33524 Triticum urartu TRIUR3_33524 I 0.884
Traes_7DS_9FBF54244 Triticum aestivum Traes_7DS_9FBF54244 I 0.884
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.947
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.952
Lus10023537.g Linum usitatissimum Lus10023537.g I 0.906
Lus10037939.g Linum usitatissimum Lus10037939.g I 0.942
Lus10038670.g Linum usitatissimum Lus10038670.g I 0.942
MDP0000258167 Malus domestica MDP0000258167 I 0.905
MDP0000437676 Malus domestica MDP0000437676 I 0.929
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I 0.926
Pavir.Fa00048 Panicum virgatum Pavir.Fa00048 I 0.887
Pavir.Fb02407 Panicum virgatum Pavir.Fb02407 I 0.887
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.937
Thhalv10020717m.g Eutrema salsugineum Thhalv10020717m.g I 0.925
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I 0.928
PK06477.1 Cannabis sativa PK06477.1 I 0.908
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.902
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.905
ANAC052 Arabidopsis thaliana AT3G10490 I 0.910
BGIOSGA026481 Oryza indica BGIOSGA026481 I 0.874
Bo1g143840 Brassica oleracea Bo1g143840 I 0.911
Bo1g143850 Brassica oleracea Bo1g143850 I 0.911
Bo5g137360 Brassica oleracea Bo5g137360 I 0.899
Bra029844 Brassica rapa Bra029844 I 0.899
Bra034118 Brassica rapa Bra034118 I 0.911
Bra034119 Brassica rapa Bra034119 I 0.911
BRADI3G12470 Brachypodium distachyon BRADI3G12470 I 0.881
F775_27564 Aegilops tauschii F775_27564 I 0.884
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.924
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.924
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.902
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.902
LPERR08G20450 Leersia perrieri LPERR08G20450 I 0.885
Traes_7BL_FB5FAC1E8 Triticum aestivum Traes_7BL_FB5FAC1E8 I 0.884
OB08G30590 Oryza brachyantha OB08G30590 I 0.882
OBART08G23760 Oryza barthii OBART08G23760 I 0.874
OGLUM08G25240 Oryza glumaepatula OGLUM08G25240 I 0.874
OLONG_023179 Oryza longistaminata OLONG_023179 I 0.874
OMERI08G18580 Oryza meridionalis OMERI08G18580 I 0.874
ONIVA08G26810 Oryza nivara ONIVA08G26810 I 0.874
OPUNC08G21700 Oryza punctata OPUNC08G21700 I 0.874
ORGLA08G0191600 Oryza glaberrima ORGLA08G0191600 I 0.874
ORUFI08G26250 Oryza rufipogon ORUFI08G26250 I 0.874
OS08G0562200 Oryza sativa OS08G0562200 I 0.874
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.937
Sb07g023900 Sorghum bicolor Sb07g023900 I 0.887
Si013361m.g Setaria italica Si013361m.g I 0.890
TCM_043357 Theobroma cacao TCM_043357 I 0.947