CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
orange1.1g008335m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g008335m.g
T298634_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g008335m
NAC/NAM
398
525
PTVAAFIPTDTELVTYHLMNKVSARSYEQLDRFIKDIELYDYEPSELSSLAYHSGHDKKYFFTRLSQPARTVNRQAQGGYWRKTGMPSYVNDKDGDAVATKTSLTYFKKQDPTSKPEKTHWLMKEYML
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CAMTA5
Arabidopsis thaliana
AT4G16150
D
0.000
Lus10036455.g
Linum usitatissimum
Lus10036455.g
I
0.000
Aquca_003_00568
Aquilegia coerulea
Aquca_003_00568
I
0.000
Bostr.19424s0974
Boechera stricta
Bostr.19424s0974
I
0.000
Bostr.30275s0060
Boechera stricta
Bostr.30275s0060
I
0.000
Cagra.0053s0009
Capsella grandiflora
Cagra.0053s0009
I
0.000
Cagra.4396s0001
Capsella grandiflora
Cagra.4396s0001
I
0.000
Carubv10004090m.g
Capsella rubella
Carubv10004090m.g
I
0.000
Carubv10012963m.g
Capsella rubella
Carubv10012963m.g
I
0.000
Ciclev10004273m.g
Citrus clementina
Ciclev10004273m.g
I
0.000
Eucgr.H04035
Eucalyptus grandis
Eucgr.H04035
I
0.000
evm.TU.supercontig_929.1
Carica papaya
evm.TU.supercontig_929.1
I
0.000
gene10891-v1.0-hybrid
Fragaria vesca
gene10891-v1.0-hybrid
I
0.000
Gorai.005G065700
Gossypium raimondii
Gorai.005G065700
I
0.000
Gorai.006G079000
Gossypium raimondii
Gorai.006G079000
I
0.000
Gorai.011G198600
Gossypium raimondii
Gorai.011G198600
I
0.000
mgf012030m
Mimulus guttatus
mgf012030m
I
0.000
Lus10037738.g
Linum usitatissimum
Lus10037738.g
I
0.000
Lus10041126.g
Linum usitatissimum
Lus10041126.g
I
0.000
MDP0000164873
Malus domestica
MDP0000164873
I
0.000
MDP0000167705
Malus domestica
MDP0000167705
I
0.000
MDP0000233860
Malus domestica
MDP0000233860
I
0.000
orange1.1g002476m.g
Citrus sinensis
orange1.1g002476m.g
I
0.000
SapurV1A.0050s0650
Salix purpurea
SapurV1A.0050s0650
I
0.000
SapurV1A.0060s0130
Salix purpurea
SapurV1A.0060s0130
I
0.000
Thhalv10020047m.g
Eutrema salsugineum
Thhalv10020047m.g
I
0.000
Thhalv10024342m.g
Eutrema salsugineum
Thhalv10024342m.g
I
0.000
PK20811.1
Cannabis sativa
PK20811.1
I
0.000
chr4.CM0429.140.nd
Lotus japonicus
chr4.CM0429.140.nd
I
0.000
POPTR_0008s10730
Populus trichocarpa
POPTR_0008s10730
I
0.000
AT3G16940
Arabidopsis thaliana
AT3G16940
I
0.000
Bo5g123580
Brassica oleracea
Bo5g123580
I
0.000
Bo8g043280
Brassica oleracea
Bo8g043280
I
0.000
Bra038040
Brassica rapa
Bra038040
I
0.000
fgenesh1_pg.C_scaffold_7002321
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_7002321
I
0.000
fgenesh1_pm.C_scaffold_3001474
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_3001474
I
0.000
GLYMA07G37090
Glycine max
GLYMA07G37090
I
0.000
GLYMA09G04310
Glycine max
GLYMA09G04310
I
0.000
GLYMA15G15350
Glycine max
GLYMA15G15350
I
0.000
GLYMA17G03510
Glycine max
GLYMA17G03510
I
0.000
MTR_2g034650
Medicago truncatula
MTR_2g034650
I
0.000
MTR_4g121840
Medicago truncatula
MTR_4g121840
I
0.000
OB07G20740
Oryza brachyantha
OB07G20740
I
0.000
mgf013655m
Mimulus guttatus
mgf013655m
I
0.000
POPTR_0010s15160
Populus trichocarpa
POPTR_0010s15160
I
0.000
PRUPE_ppa001493mg
Prunus persica
PRUPE_ppa001493mg
I
0.000
Solyc01g060170.2
Solanum lycopersicum
Solyc01g060170.2
I
0.000
Solyc12g099340.1
Solanum lycopersicum
Solyc12g099340.1
I
0.000
TCM_021327
Theobroma cacao
TCM_021327
I
0.000
Traes_2AS_4C4190DEB
Triticum aestivum
Traes_2AS_4C4190DEB
I
0.000
VIT_05s0077g01240
Vitis vinifera
VIT_05s0077g01240
I
0.000
Ca_02997
Cicer arietinum
Ca_02997
I
0.000
Cla009415
Citrullus lanatus
Cla009415
I
0.000
29889.m003269
Ricinus communis
29889.m003269
I
0.000
cassava40488.m1
Manihot esculenta
cassava40488.m1
I
0.000
Cucsa.325250
Cucumis sativus
Cucsa.325250
I
0.000
AMTR_s00057p00042800
Amborella trichopoda
AMTR_s00057p00042800
I
0.000