CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g008335m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g008335m.g
T298634_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g008335m
NAC/NAM
398
525
PTVAAFIPTDTELVTYHLMNKVSARSYEQLDRFIKDIELYDYEPSELSSLAYHSGHDKKYFFTRLSQPARTVNRQAQGGYWRKTGMPSYVNDKDGDAVATKTSLTYFKKQDPTSKPEKTHWLMKEYML
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10031100m.g
Citrus clementina
Ciclev10031100m.g
N
0.998
Ciclev10033389m.g
Citrus clementina
Ciclev10033389m.g
N
0.966
orange1.1g044940m.g
Citrus sinensis
orange1.1g044940m.g
N
0.948
Eucgr.L02674
Eucalyptus grandis
Eucgr.L02674
N
0.923
orange1.1g043513m.g
Citrus sinensis
orange1.1g043513m.g
N
0.923
Ciclev10013626m.g
Citrus clementina
Ciclev10013626m.g
N
0.916
Ciclev10013730m.g
Citrus clementina
Ciclev10013730m.g
N
0.916
orange1.1g042765m.g
Citrus sinensis
orange1.1g042765m.g
N
0.898
Eucgr.B03693
Eucalyptus grandis
Eucgr.B03693
N
0.894
orange1.1g041697m.g
Citrus sinensis
orange1.1g041697m.g
N
0.894
Ciclev10033719m.g
Citrus clementina
Ciclev10033719m.g
N
0.892
Ciclev10033541m.g
Citrus clementina
Ciclev10033541m.g
N
0.887
Ciclev10033346m.g
Citrus clementina
Ciclev10033346m.g
N
0.886
Ciclev10033459m.g
Citrus clementina
Ciclev10033459m.g
N
0.886
Ciclev10033526m.g
Citrus clementina
Ciclev10033526m.g
N
0.886
Ciclev10033536m.g
Citrus clementina
Ciclev10033536m.g
N
0.886
Ciclev10033957m.g
Citrus clementina
Ciclev10033957m.g
N
0.886
orange1.1g046003m.g
Citrus sinensis
orange1.1g046003m.g
N
0.884
Eucgr.B03703
Eucalyptus grandis
Eucgr.B03703
N
0.876
GRMZM2G158204
Zea mays
GRMZM2G158204
N
0.873