CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g042765m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g042765m.g
T298710_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g042765m
NAC/NAM
31
163
PHGFQFRPSDEELIEHYLKKKVSGILIPLAEYFIRDCNLYETKPSEIWDSHGGPFFNIDEDLYFFTQLKKKSSKGSRIDRKVSSSSGAWQWEDAGKDIVSGQSKVKIGSKKRFRYEKKGCEDYGPWIMHECTL
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10033346m.g
Citrus clementina
Ciclev10033346m.g
N
0.996
Ciclev10033459m.g
Citrus clementina
Ciclev10033459m.g
N
0.996
Ciclev10033526m.g
Citrus clementina
Ciclev10033526m.g
N
0.996
Ciclev10033536m.g
Citrus clementina
Ciclev10033536m.g
N
0.996
Ciclev10033541m.g
Citrus clementina
Ciclev10033541m.g
N
0.996
Ciclev10033719m.g
Citrus clementina
Ciclev10033719m.g
N
0.996
Ciclev10033957m.g
Citrus clementina
Ciclev10033957m.g
N
0.996
orange1.1g041697m.g
Citrus sinensis
orange1.1g041697m.g
N
0.995
orange1.1g046003m.g
Citrus sinensis
orange1.1g046003m.g
N
0.995
orange1.1g044940m.g
Citrus sinensis
orange1.1g044940m.g
N
0.971
orange1.1g043513m.g
Citrus sinensis
orange1.1g043513m.g
N
0.945
Eucgr.B03693
Eucalyptus grandis
Eucgr.B03693
N
0.939
Ciclev10013626m.g
Citrus clementina
Ciclev10013626m.g
N
0.938
Ciclev10013730m.g
Citrus clementina
Ciclev10013730m.g
N
0.938
Eucgr.L02674
Eucalyptus grandis
Eucgr.L02674
N
0.929
orange1.1g045647m.g
Citrus sinensis
orange1.1g045647m.g
N
0.917
Eucgr.B03703
Eucalyptus grandis
Eucgr.B03703
N
0.910
Ciclev10033436m.g
Citrus clementina
Ciclev10033436m.g
N
0.907
VIT_19s0027g00230
Vitis vinifera
VIT_19s0027g00230
N
0.905
orange1.1g008335m.g
Citrus sinensis
orange1.1g008335m.g
N
0.898
Ciclev10031100m.g
Citrus clementina
Ciclev10031100m.g
N
0.896
Thhalv10015488m.g
Eutrema salsugineum
Thhalv10015488m.g
N
0.895
PGSC0003DMG400036651
Solanum tuberosum
PGSC0003DMG400036651
N
0.889
Ciclev10023292m.g
Citrus clementina
Ciclev10023292m.g
N
0.876
gene30018-v1.0-hybrid
Fragaria vesca
gene30018-v1.0-hybrid
N
0.876
ONIVA04G24570
Oryza nivara
ONIVA04G24570
N
0.875
Ciclev10013622m.g
Citrus clementina
Ciclev10013622m.g
N
0.875
OGLUM04G25460
Oryza glumaepatula
OGLUM04G25460
N
0.874