CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10033436m.g
(
Citrus clementina
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Ciclev10033436m.g
T297650_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10033436m
NAC/NAM
9
141
PHGFQFRPSDEELIEHYLKKKVSGIFIPLAEYFIMDCNLYEEKPSEIWDSHGGPFLNADEDLYFFTQLKKKSSKGSRIDRKVGSSGGTWQGEDAGKDIVIGQSKIKIGSKKRFRYEKQGCEDHGAWIMHEYTL
Links
Other
NAC/NAM
family TFs
Other
Citrus clementina
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g038876m.g
Citrus sinensis
orange1.1g038876m.g
N
0.997
Ciclev10033744m.g
Citrus clementina
Ciclev10033744m.g
N
0.996
Pm001136
Prunus mume
Pm001136
N
0.950
MDP0000256806
Malus domestica
MDP0000256806
N
0.940
29657.m000463
Ricinus communis
29657.m000463
N
0.937
Ciclev10033346m.g
Citrus clementina
Ciclev10033346m.g
N
0.933
Ciclev10033459m.g
Citrus clementina
Ciclev10033459m.g
N
0.933
Ciclev10033526m.g
Citrus clementina
Ciclev10033526m.g
N
0.933
Ciclev10033536m.g
Citrus clementina
Ciclev10033536m.g
N
0.933
Ciclev10033541m.g
Citrus clementina
Ciclev10033541m.g
N
0.933
Ciclev10033957m.g
Citrus clementina
Ciclev10033957m.g
N
0.933
orange1.1g046003m.g
Citrus sinensis
orange1.1g046003m.g
N
0.927
Ciclev10033719m.g
Citrus clementina
Ciclev10033719m.g
N
0.926
orange1.1g041697m.g
Citrus sinensis
orange1.1g041697m.g
N
0.920
Ciclev10033879m.g
Citrus clementina
Ciclev10033879m.g
N
0.919
orange1.1g042765m.g
Citrus sinensis
orange1.1g042765m.g
N
0.907
gene12168-v1.0-hybrid
Fragaria vesca
gene12168-v1.0-hybrid
N
0.885
gene12133-v1.0-hybrid
Fragaria vesca
gene12133-v1.0-hybrid
N
0.882
BGIOSGA029518
Oryza indica
BGIOSGA029518
N
0.880
OMERI09G11680
Oryza meridionalis
OMERI09G11680
N
0.880
ONIVA09G15620
Oryza nivara
ONIVA09G15620
N
0.880
ORUFI09G16180
Oryza rufipogon
ORUFI09G16180
N
0.879
OS09G0493700
Oryza sativa
OS09G0493700
N
0.879
Pm001156
Prunus mume
Pm001156
N
0.878
OBART09G15000
Oryza barthii
OBART09G15000
N
0.877
ORGLA09G0115600
Oryza glaberrima
ORGLA09G0115600
N
0.877
OPUNC09G13450
Oryza punctata
OPUNC09G13450
N
0.876
OGLUM09G15640
Oryza glumaepatula
OGLUM09G15640
N
0.875