CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g038876m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g038876m.g
T298698_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g038876m
NAC/NAM
9
127
PHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQG
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10033436m.g
Citrus clementina
Ciclev10033436m.g
N
0.997
Ciclev10033744m.g
Citrus clementina
Ciclev10033744m.g
N
0.994
Pm001136
Prunus mume
Pm001136
N
0.947
MDP0000256806
Malus domestica
MDP0000256806
N
0.931
29657.m000463
Ricinus communis
29657.m000463
N
0.928
Ciclev10033346m.g
Citrus clementina
Ciclev10033346m.g
N
0.901
Ciclev10033459m.g
Citrus clementina
Ciclev10033459m.g
N
0.901
Ciclev10033526m.g
Citrus clementina
Ciclev10033526m.g
N
0.901
Ciclev10033536m.g
Citrus clementina
Ciclev10033536m.g
N
0.901
Ciclev10033541m.g
Citrus clementina
Ciclev10033541m.g
N
0.901
Ciclev10033957m.g
Citrus clementina
Ciclev10033957m.g
N
0.901
orange1.1g041697m.g
Citrus sinensis
orange1.1g041697m.g
N
0.901
gene12168-v1.0-hybrid
Fragaria vesca
gene12168-v1.0-hybrid
N
0.899
gene12133-v1.0-hybrid
Fragaria vesca
gene12133-v1.0-hybrid
N
0.897
orange1.1g046003m.g
Citrus sinensis
orange1.1g046003m.g
N
0.896
Ciclev10033719m.g
Citrus clementina
Ciclev10033719m.g
N
0.891
Ciclev10033879m.g
Citrus clementina
Ciclev10033879m.g
N
0.885