Pavir.J07259 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J07259 T298946_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J07259.1.p NAC/NAM 7 133
Pavir.J07259.2.p NAC/NAM 7 133
Pavir.J07259.3.p NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10004501m.g Eutrema salsugineum Thhalv10004501m.g I 0.872
Aquca_022_00282 Aquilegia coerulea Aquca_022_00282 I 0.893
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.894
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.894
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.894
Si001354m.g Setaria italica Si001354m.g N 0.912
Sb09g020880 Sorghum bicolor Sb09g020880 N 0.956
Traes_1AL_C4FA8404A Triticum aestivum Traes_1AL_C4FA8404A N 0.959
Traes_1BL_9018AA7BA Triticum aestivum Traes_1BL_9018AA7BA N 0.959
Traes_1DL_F410CF9FD Triticum aestivum Traes_1DL_F410CF9FD N 0.959
Traes_5AL_41B98AAEF Triticum aestivum Traes_5AL_41B98AAEF N 0.880
TRIUR3_22935 Triticum urartu TRIUR3_22935 N 0.959
mgf025137m Mimulus guttatus mgf025137m N 0.896
Pavir.J02083 Panicum virgatum Pavir.J02083 N 0.969
Pavir.J18990 Panicum virgatum Pavir.J18990 N 0.895
PDK_20s1369501g001 Phoenix dactylifera PDK_20s1369501g001 N 0.875
OBART05G17230 Oryza barthii OBART05G17230 N 0.919
BRADI2G24790 Brachypodium distachyon BRADI2G24790 N 0.960
F775_32837 Aegilops tauschii F775_32837 N 0.959
GRMZM2G104400 Zea mays GRMZM2G104400 N 0.951
GRMZM2G456568 Zea mays GRMZM2G456568 N 0.932
GSMUA_Achr10G04530_001 Musa acuminata GSMUA_Achr10G04530_001 N 0.892
GSMUA_Achr11G09000_001 Musa acuminata GSMUA_Achr11G09000_001 N 0.880
LPERR05G13650 Leersia perrieri LPERR05G13650 N 0.914
OB05G25040 Oryza brachyantha OB05G25040 N 0.917
BGIOSGA018023 Oryza indica BGIOSGA018023 N 0.919
OGLUM05G18240 Oryza glumaepatula OGLUM05G18240 N 0.919
OMERI05G14890 Oryza meridionalis OMERI05G14890 N 0.919
ONIVA05G17930 Oryza nivara ONIVA05G17930 N 0.919
OPUNC05G15090 Oryza punctata OPUNC05G15090 N 0.919
ORGLA05G0148600 Oryza glaberrima ORGLA05G0148600 N 0.919
ORUFI05G18410 Oryza rufipogon ORUFI05G18410 N 0.919
OS05G0426200 Oryza sativa OS05G0426200 N 0.919