CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr4.CM0175.500.nc
(
Lotus japonicus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
chr4.CM0175.500.nc
T299405_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr4.CM0175.500.nc
NAC/NAM
15
141
PPGFRFQPTDEELVFQYLKCKVFSFPLPASIIPQINVCSYDPWDLPGNCDYEQERYFFSSKESKYRNGNRMNRKTNCGYWKATGSDKKISSSTSNDGIMGIRKTLVFYQGKSPNGSKTDWVLHEYRL
Links
Other
NAC/NAM
family TFs
Other
Lotus japonicus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_014713
Theobroma cacao
TCM_014713
I
0.890
Eucgr.B03537
Eucalyptus grandis
Eucgr.B03537
I
0.875
GLYMA05G38380
Glycine max
GLYMA05G38380
N
0.913
GLYMA06G17480
Glycine max
GLYMA06G17480
N
0.887
GLYMA08G01280
Glycine max
GLYMA08G01280
N
0.913
MTR_3g098810
Medicago truncatula
MTR_3g098810
N
0.907
MTR_8g099750
Medicago truncatula
MTR_8g099750
N
0.885
PRUPE_ppa027024mg
Prunus persica
PRUPE_ppa027024mg
N
0.880
Pm024558
Prunus mume
Pm024558
N
0.880
gene06460-v1.0-hybrid
Fragaria vesca
gene06460-v1.0-hybrid
N
0.900
MDP0000130686
Malus domestica
MDP0000130686
N
0.884