CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000130686
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000130686
T298389_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000130686
NAC/NAM
15
138
PPGFRFQPTDEELVFQYLRCKVFSCPLPASIIPEINVCMYDPWDLPGNLEQERYFFSNKESKYRNGNRANRVTSSGYWKATGADKKIVSSRRNHIVGKKKTLVFYRGKSPHVSKTDWVMHEYCL
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa027024mg
Prunus persica
PRUPE_ppa027024mg
N
0.960
Pm024558
Prunus mume
Pm024558
N
0.960
gene06460-v1.0-hybrid
Fragaria vesca
gene06460-v1.0-hybrid
N
0.949
MDP0000147080
Malus domestica
MDP0000147080
I
0.944
POPTR_0015s11420
Populus trichocarpa
POPTR_0015s11420
N
0.914
POPTR_0012s10530
Populus trichocarpa
POPTR_0012s10530
N
0.913
GLYMA06G17480
Glycine max
GLYMA06G17480
N
0.906
MTR_8g099750
Medicago truncatula
MTR_8g099750
N
0.904
TCM_014713
Theobroma cacao
TCM_014713
I
0.903
MTR_3g098810
Medicago truncatula
MTR_3g098810
N
0.900
SapurV1A.1562s0030
Salix purpurea
SapurV1A.1562s0030
N
0.900
SapurV1A.1562s0040
Salix purpurea
SapurV1A.1562s0040
N
0.900
GLYMA08G47520
Glycine max
GLYMA08G47520
I
0.898
GLYMA18G53954
Glycine max
GLYMA18G53954
I
0.898
SapurV1A.0614s0190
Salix purpurea
SapurV1A.0614s0190
N
0.897
SapurV1A.1580s0010
Salix purpurea
SapurV1A.1580s0010
N
0.897
MTR_7g005280
Medicago truncatula
MTR_7g005280
I
0.896
Ca_05696
Cicer arietinum
Ca_05696
N
0.896
30147.m014441
Ricinus communis
30147.m014441
N
0.895
VIT_17s0000g00770
Vitis vinifera
VIT_17s0000g00770
N
0.886
Aquca_011_00050
Aquilegia coerulea
Aquca_011_00050
I
0.886
chr4.CM0175.500.nc
Lotus japonicus
chr4.CM0175.500.nc
N
0.884
PK12461.1
Cannabis sativa
PK12461.1
I
0.882
chr1.CM0017.80.nc
Lotus japonicus
chr1.CM0017.80.nc
I
0.880
Cla001517
Citrullus lanatus
Cla001517
I
0.877
Cucsa.349370
Cucumis sativus
Cucsa.349370
I
0.877
PRUPE_ppa010222mg
Prunus persica
PRUPE_ppa010222mg
I
0.876
Pm007070
Prunus mume
Pm007070
I
0.876
30128.m009035
Ricinus communis
30128.m009035
I
0.876
POPTR_0001s13380
Populus trichocarpa
POPTR_0001s13380
I
0.874
evm.TU.supercontig_4.138
Carica papaya
evm.TU.supercontig_4.138
N
0.874
cassava1138.valid.m1
Manihot esculenta
cassava1138.valid.m1
I
0.873
cassava12891.valid.m1
Manihot esculenta
cassava12891.valid.m1
I
0.872
SapurV1A.0173s0020
Salix purpurea
SapurV1A.0173s0020
I
0.872