Gfo_R011942 (Geospiza fortis)
Ndt80/PhoG

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05224 (NDT80_PhoG) IPR007888 Gfo_R011942 T300188_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYRF
M02385_2.00 		Homo sapiens
TGGTACCA
TGGTACCA		 PBM
Weirauch et al.(2014)
pTH9310 		0.916 0.916
Myrf
M02386_2.00 		Mus musculus
NNGTRHSNNN
NNNSDYACNN		 PBM
Weirauch et al.(2014)
pTH8554 		0.916 0.916
myrf
M02384_2.00 		Danio rerio
TGGTACCR
YGGTACCA		 PBM
Weirauch et al.(2014)
pTH8654 		0.846 0.846
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R011942 Ndt80/PhoG 345 492

Links

Other Ndt80/PhoG family TFs
Other Geospiza fortis TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Myrf Mus musculus ENSMUSG00000036098 D 0.916
myrf Danio rerio ENSDARG00000078676 D 0.846
MYRF Homo sapiens ENSG00000124920 D 0.916
MYRF Otolemur garnettii ENSOGAG00000010786 I 0.909
MYRF Pan troglodytes ENSPTRG00000003749 I 0.916
ENSPSIG00000015590 Pelodiscus sinensis ENSPSIG00000015590 I 0.979
ENSPPYG00000003180 Pongo abelii ENSPPYG00000003180 I 0.909
ENSPFOG00000011050 Poecilia formosa ENSPFOG00000011050 I 0.860
MYRF Procavia capensis ENSPCAG00000017079 I 0.846
ENSPANG00000013413 Papio anubis ENSPANG00000013413 I 0.909
MYRF Oryzias latipes ENSORLG00000006459 I 0.846
ENSONIG00000015523 Oreochromis niloticus ENSONIG00000015523 I 0.846
MYRF Pteropus vampyrus ENSPVAG00000012342 I 0.916
MYRF Oryctolagus cuniculus ENSOCUG00000003269 I 0.909
ENSOARG00000020232 Ovis aries ENSOARG00000020232 I 0.741
ENSOARG00000013482 Ovis aries ENSOARG00000013482 I 0.846
ENSNLEG00000003069 Nomascus leucogenys ENSNLEG00000003069 I 0.762
ENSMPUG00000014126 Mustela putorius furo ENSMPUG00000014126 I 0.909
MYRF Macaca mulatta ENSMMUG00000006655 I 0.909
ENSMMUG00000006501 Macaca mulatta ENSMMUG00000006501 I 0.796
MYRF Myotis lucifugus ENSMLUG00000010326 I 0.846
Aan_R010750 Calypte anna Aan_R010750 I 0.957
myrf Xenopus tropicalis XB-GENE-1020968 I 0.860
Tal_R006175 Tyto alba Tal_R006175 I 0.972
Pvit_15884 Pogona vitticeps Pvit_15884 I 0.951
ENSP00000278836 Macaca fascicularis ENSP00000278836 I 0.867
ENSBTAP00000009187-D1 Bos grunniens ENSBTAP00000009187-D1 I 0.874
Cmyd_10008461 Chelonia mydas Cmyd_10008461 I 0.734
Brh_R007745 Buceros rhinoceros Brh_R007745 I 0.972
Alligator_sinensis_CCG012901.1 Alligator sinensis Alligator_sinensis_CCG012901.1 I 0.923
Afo_R010549 Aptenodytes forsteri Afo_R010549 I 0.972
myrf.L Xenopus laevis XB-GENE-1020972 I 0.832
ENSXMAG00000003748 Xiphophorus maculatus ENSXMAG00000003748 I 0.867
MYRF Takifugu rubripes ENSTRUG00000005197 I 0.839
MYRF Tetraodon nigroviridis ENSTNIG00000016074 I 0.825
ENSTGUG00000006600 Taeniopygia guttata ENSTGUG00000006600 I 1.000
ENSSTOG00000000529 Ictidomys tridecemlineatus ENSSTOG00000000529 I 0.909
MYRF Sus scrofa ENSSSCG00000013078 I 0.916
ENSSHAG00000002443 Sarcophilus harrisii ENSSHAG00000002443 I 0.923
Myrf Rattus norvegicus ENSRNOG00000028274 I 0.916
myrf Gasterosteus aculeatus ENSGACG00000005416 I 0.832
MYRF Callithrix jacchus ENSCJAG00000019218 I 0.909
MYRF Canis familiaris ENSCAFG00000016062 I 0.916
MYRF Cavia porcellus ENSCPOG00000013543 I 0.895
ENSCSAG00000006452 Chlorocebus sabaeus ENSCSAG00000006452 I 0.909
MYRF Dasypus novemcinctus ENSDNOG00000005294 I 0.902
MYRF Bos taurus ENSBTAG00000006990 I 0.902
Myrf Dipodomys ordii ENSDORG00000002029 I 0.916
MYRF Equus caballus ENSECAG00000021799 I 0.874
ENSAPLG00000006054 Anas platyrhynchos ENSAPLG00000006054 I 1.000
ENSFALG00000011806 Ficedula albicollis ENSFALG00000011806 I 1.000
MYRF Felis catus ENSFCAG00000013683 I 0.916
ENSAMXG00000015793 Astyanax mexicanus ENSAMXG00000015793 I 0.867
ENSGALG00000020522 Gallus gallus ENSGALG00000020522 I 1.000
MYRF Meleagris gallopavo ENSMGAG00000004733 I 1.000
MYRF Anolis carolinensis ENSACAG00000017691 I 0.909
ENSGMOG00000017696 Gadus morhua ENSGMOG00000017696 I 0.860
ENSLACG00000016455 Latimeria chalumnae ENSLACG00000016455 I 0.902
ENSAMEG00000016669 Ailuropoda melanoleuca ENSAMEG00000016669 I 0.916
ENSMEUG00000004200 Macropus eugenii ENSMEUG00000004200 I 0.895
MYRF Gorilla gorilla ENSGGOG00000012529 I 0.916
Tal_R011346 Tyto alba Tal_R011346 N 0.706
MYRFL Myotis lucifugus ENSMLUG00000009508 N 0.734
Aan_R014790 Calypte anna Aan_R014790 N 0.713
Afo_R009725 Aptenodytes forsteri Afo_R009725 N 0.713
MYRFL Bos taurus ENSBTAG00000014829 N 0.734
Sakowv30007714m.g Saccoglossus kowalevskii Sakowv30007714m.g N 0.713
Ocbimv22003657m.g Octopus bimaculoides Ocbimv22003657m.g N 0.704
ENSAPLG00000012837 Anas platyrhynchos ENSAPLG00000012837 N 0.706
ENSAMEG00000011926 Ailuropoda melanoleuca ENSAMEG00000011926 N 0.727
ENSAMXG00000021027 Astyanax mexicanus ENSAMXG00000021027 N 0.706
ENSBTAP00000019581-D1 Bos grunniens ENSBTAP00000019581-D1 N 0.734
MYRFL Anolis carolinensis ENSACAG00000004738 N 0.706
ENSMMUP00000039187 Macaca fascicularis ENSMMUP00000039187 N 0.706
Ogr07579 Ophisaurus gracilis Ogr07579 N 0.783
MYRFL Gallus gallus ENSGALG00000019352 N 0.727
MYRFL Meleagris gallopavo ENSMGAG00000010606 N 0.727
MYRFL Monodelphis domestica ENSMODG00000020385 N 0.734
ENSMPUG00000017495 Mustela putorius furo ENSMPUG00000017495 N 0.741
Myrfl Mus musculus ENSMUSG00000034057 N 0.734
ENSLOCG00000016212 Lepisosteus oculatus ENSLOCG00000016212 N 0.727
MYRFL Loxodonta africana ENSLAFG00000001286 N 0.706
MYRFL Ornithorhynchus anatinus ENSOANG00000005958 N 0.727
MYRFL Oryctolagus cuniculus ENSOCUG00000002982 N 0.720
MYRFL Otolemur garnettii ENSOGAG00000028145 N 0.720
ENSCJAG00000036263 Callithrix jacchus ENSCJAG00000036263 N 0.720
MYRFL Homo sapiens ENSG00000166268 N 0.720
MYRFL Felis catus ENSFCAG00000031998 N 0.713
ENSFALG00000010237 Ficedula albicollis ENSFALG00000010237 N 0.727
Myrfl Rattus norvegicus ENSRNOG00000021833 N 0.720
MYRFL Dasypus novemcinctus ENSDNOG00000044488 N 0.720
CABZ01077402.1 Danio rerio ENSDARG00000101645 N 0.706
ENSSTOG00000020113 Ictidomys tridecemlineatus ENSSTOG00000020113 N 0.734
MYRFL Cavia porcellus ENSCPOG00000013850 N 0.706