CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CJA37776
(
Caenorhabditis japonica
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CJA37776
T302005_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.928
0.586
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.897
0.629
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA37776
Nuclear receptor
5
74
EVCLVCQDVSSGYHYGIPSCNGCKTFFRRTVMKKQRFVCQFDQNCLVDKSIRCACKFCRFEKCLKVGMNK
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis japonica
TFs
190 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOM041320
Anopheles coluzzii
ACOM041320
N
ASTEI03876
Anopheles stephensi
ASTEI03876
N
ASIS019751
Anopheles sinensis
ASIS019751
N
AQUA007357
Anopheles quadriannulatus
AQUA007357
N
AMIN008889
Anopheles minimus
AMIN008889
N
AMEM015681
Anopheles merus
AMEM015681
N
AMEC010679
Anopheles melas
AMEC010679
N
AMAM012080
Anopheles maculatus
AMAM012080
N
AFUN004112
Anopheles funestus
AFUN004112
N
AFAF000059
Anopheles farauti
AFAF000059
N
AEPI007582
Anopheles epiroticus
AEPI007582
N
ADIR000189
Anopheles dirus
ADIR000189
N
ACUA014243
Anopheles culicifacies
ACUA014243
N
CpipJ_CPIJ016287
Culex pipiens
CpipJ_CPIJ016287
N
ACHR004575
Anopheles christyi
ACHR004575
N
AARA002743
Anopheles arabiensis
AARA002743
N
LDEC018156
Leptinotarsa decemlineata
LDEC018156
N
TC015473
Tribolium castaneum
TC015473
N
SINV16194
Solenopsis invicta
SINV16194
N
NV16704
Nasonia vitripennis
NV16704
N
GB44351
Apis mellifera
GB44351
N
CPIJ016287
Culex quinquefasciatus
CPIJ016287
N
AGAP011548
Anopheles gambiae
AGAP011548
N
ADAC009323
Anopheles darlingi
ADAC009323
N
ACEP27886
Atta cephalotes
ACEP27886
N
AAEL007260
Aedes aegypti
AAEL007260
N