CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA37776
(
Caenorhabditis japonica
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CJA37776
T302005_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.928
0.586
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.897
0.629
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA37776
Nuclear receptor
5
74
EVCLVCQDVSSGYHYGIPSCNGCKTFFRRTVMKKQRFVCQFDQNCLVDKSIRCACKFCRFEKCLKVGMNK
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis japonica
TFs
190 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CJA01292
Caenorhabditis japonica
CJA01292
I
0.983
CBG23318
Caenorhabditis briggsae
CBG23318
I
0.980
nhr-68
Caenorhabditis elegans
WBGene00003658
I
0.980
CRE26982
Caenorhabditis remanei
CRE26982
I
0.979
CBN30215
Caenorhabditis brenneri
CBN30215
I
0.973
nhr-101
Caenorhabditis elegans
WBGene00003691
I
0.972
CBG23319
Caenorhabditis briggsae
CBG23319
I
0.964
CRE26981
Caenorhabditis remanei
CRE26981
I
0.961
CBG16594
Caenorhabditis briggsae
CBG16594
I
0.958
CBN20518
Caenorhabditis brenneri
CBN20518
I
0.958
CRE25378
Caenorhabditis remanei
CRE25378
I
0.958
SSTP_0000546600
Strongyloides stercoralis
SSTP_0000546600
I
0.957
nhr-10
Caenorhabditis elegans
WBGene00003609
I
0.956
PTRK_0001312000
Parastrongyloides trichosuri
PTRK_0001312000
I
0.951
ANCCAN_14103
Ancylostoma caninum
ANCCAN_14103
I
0.950
ANCCAN_17081
Ancylostoma caninum
ANCCAN_17081
I
0.950
ALUE_0002179401
Ascaris lumbricoides
ALUE_0002179401
I
0.949
ASU_12501
Ascaris suum
ASU_12501
I
0.949
NECAME_00872
Necator americanus
NECAME_00872
I
0.949
SPAL_0000490500
Strongyloides papillosus
SPAL_0000490500
I
0.949
SVE_1951500
Strongyloides venezuelensis
SVE_1951500
I
0.949
L596_g23777
Steinernema carpocapsae
L596_g23777
I
0.948
L893_g25227
Steinernema glaseri
L893_g25227
I
0.948
MhA1_Contig2491.frz3.gene4
Meloidogyne hapla
MhA1_Contig2491.frz3.gene4
I
0.948
BXY_0631600
Bursaphelenchus xylophilus
BXY_0631600
I
0.946
HCOI00601000
Haemonchus contortus
HCOI00601000
I
0.945
HPLM_0000564201
Haemonchus placei
HPLM_0000564201
I
0.945
BXY_1057600
Bursaphelenchus xylophilus
BXY_1057600
I
0.943
ACAC_0001297301
Angiostrongylus cantonensis
ACAC_0001297301
I
0.942
PTRK_0000720500
Parastrongyloides trichosuri
PTRK_0000720500
I
0.937
SSTP_0000145700
Strongyloides stercoralis
SSTP_0000145700
I
0.937
SPAL_0000841700
Strongyloides papillosus
SPAL_0000841700
I
0.936
SVE_1799100
Strongyloides venezuelensis
SVE_1799100
I
0.936
L889_g17247
Steinernema feltiae
L889_g17247
I
0.934
L898_g26357
Steinernema monticolum
L898_g26357
I
0.934
WBGene00236987
Onchocerca volvulus
WBGene00236987
I
0.931
nOo.2.0.1.g02345
Onchocerca ochengi
nOo.2.0.1.g02345
I
0.931
TCLT_0000461101
Thelazia callipaeda
TCLT_0000461101
I
0.931
CBG03844
Caenorhabditis briggsae
CBG03844
I
0.928
CBN18198
Caenorhabditis brenneri
CBN18198
I
0.928
CBN20749
Caenorhabditis brenneri
CBN20749
I
0.928
CRE08259
Caenorhabditis remanei
CRE08259
I
0.928
nhr-49
Caenorhabditis elegans
WBGene00003639
D
0.928
ASU_03870
Ascaris suum
ASU_03870
I
0.928
GPLIN_001175700
Globodera pallida
GPLIN_001175700
I
0.928
PEQ_0000391501
Parascaris equorum
PEQ_0000391501
I
0.928
LOAG_08615
Loa loa
LOAG_08615
I
0.927
DME_0000591901
Dracunculus medinensis
DME_0000591901
I
0.923
L893_g13285
Steinernema glaseri
L893_g13285
I
0.921
scaffold605-EXSNAP2012.9
Pristionchus exspectatus
scaffold605-EXSNAP2012.9
I
0.921
L596_g11035
Steinernema carpocapsae
L596_g11035
I
0.920
Bm4980
Brugia malayi
Bm4980
I
0.919
BTMF_0000217201
Brugia timori
BTMF_0000217201
I
0.919
EVEC_0001313601
Enterobius vermicularis
EVEC_0001313601
I
0.912
ACAC_0000711701
Angiostrongylus cantonensis
ACAC_0000711701
I
0.903
DICVIV_00957
Dictyocaulus viviparus
DICVIV_00957
I
0.903
DME_0000693601
Dracunculus medinensis
DME_0000693601
I
0.903
HCOI00618700
Haemonchus contortus
HCOI00618700
I
0.903
CBG01866
Caenorhabditis briggsae
CBG01866
I
0.897
CBN19235
Caenorhabditis brenneri
CBN19235
I
0.897
CJA13458
Caenorhabditis japonica
CJA13458
I
0.897
CRE03310
Caenorhabditis remanei
CRE03310
I
0.897
nhr-1
Caenorhabditis elegans
WBGene00003600
D
0.897
ANCCEY_01961
Ancylostoma ceylanicum
ANCCEY_01961
I
0.897
HCOI01554200
Haemonchus contortus
HCOI01554200
I
0.897
HPBE_0000837301
Heligmosomoides bakeri
HPBE_0000837301
I
0.897
L596_g12276
Steinernema carpocapsae
L596_g12276
I
0.895
L889_g7780
Steinernema feltiae
L889_g7780
I
0.895
L892_g8671
Steinernema scapterisci
L892_g8671
I
0.895
L898_g22454
Steinernema monticolum
L898_g22454
I
0.895
ACOC_0000700901
Angiostrongylus costaricensis
ACOC_0000700901
I
0.892
DICVIV_09815
Dictyocaulus viviparus
DICVIV_09815
I
0.892
PTRK_0001020800
Parastrongyloides trichosuri
PTRK_0001020800
I
0.886
SPAL_0001099500
Strongyloides papillosus
SPAL_0001099500
I
0.886
SSTP_0000769100
Strongyloides stercoralis
SSTP_0000769100
I
0.886
SVE_0858700
Strongyloides venezuelensis
SVE_0858700
I
0.886
EVEC_0000027301
Enterobius vermicularis
EVEC_0000027301
I
0.882
Bm5319
Brugia malayi
Bm5319
I
0.876
LOAG_00300
Loa loa
LOAG_00300
I
0.876
BTMF_0001388101
Brugia timori
BTMF_0001388101
I
0.876
L596_g12321
Steinernema carpocapsae
L596_g12321
I
0.876
L889_g29879
Steinernema feltiae
L889_g29879
I
0.876
L893_g3010
Steinernema glaseri
L893_g3010
I
0.876
L898_g2764
Steinernema monticolum
L898_g2764
I
0.876
nDi.2.2.2.g02318
Dirofilaria immitis
nDi.2.2.2.g02318
I
0.876
nOo.2.0.1.g01530
Onchocerca ochengi
nOo.2.0.1.g01530
I
0.876
OFLC_0001450101
Onchocerca flexuosa
OFLC_0001450101
I
0.876
SMUV_0000708401
Syphacia muris
SMUV_0000708401
I
0.876
TCLT_0000399401
Thelazia callipaeda
TCLT_0000399401
I
0.876
HCOI00592600
Haemonchus contortus
HCOI00592600
I
0.873
OESDEN_04341
Oesophagostomum dentatum
OESDEN_04341
I
0.871
WBGene00241993
Onchocerca volvulus
WBGene00241993
I
0.869
PTRK_0000994100
Parastrongyloides trichosuri
PTRK_0000994100
I
0.862
SPAL_0001637600
Strongyloides papillosus
SPAL_0001637600
I
0.862
SSTP_0000055100
Strongyloides stercoralis
SSTP_0000055100
I
0.862
SVE_0429000
Strongyloides venezuelensis
SVE_0429000
I
0.862
CBN11572
Caenorhabditis brenneri
CBN11572
I
0.852
nhr-35
Caenorhabditis elegans
WBGene00003628
I
0.852
WUBG_08038
Wuchereria bancrofti
WUBG_08038
I
0.850
Bm5520
Brugia malayi
Bm5520
I
0.850
LOAG_03407
Loa loa
LOAG_03407
I
0.850
WBGene00240723
Onchocerca volvulus
WBGene00240723
I
0.850
BTMF_0001127801
Brugia timori
BTMF_0001127801
I
0.850
DME_0001010101
Dracunculus medinensis
DME_0001010101
I
0.850
EEL_0000987201
Elaeophora elaphi
EEL_0000987201
I
0.850
nAv.1.0.1.g02923
Acanthocheilonema viteae
nAv.1.0.1.g02923
I
0.850
nOo.2.0.1.g03355
Onchocerca ochengi
nOo.2.0.1.g03355
I
0.850
SMUV_0000795201
Syphacia muris
SMUV_0000795201
I
0.850
CBG14485
Caenorhabditis briggsae
CBG14485
I
0.848
CJA16040
Caenorhabditis japonica
CJA16040
I
0.848
CRE00809
Caenorhabditis remanei
CRE00809
I
0.848
SMUV_0001036101
Syphacia muris
SMUV_0001036101
I
0.845
SSTP_0001081300
Strongyloides stercoralis
SSTP_0001081300
I
0.837
Ppa-nhr-120
Pristionchus pacificus
PPA00183
I
0.836
scaffold384-EXSNAP2012.4
Pristionchus exspectatus
scaffold384-EXSNAP2012.4
I
0.836
scaffold572-EXSNAP2012.7
Pristionchus exspectatus
scaffold572-EXSNAP2012.7
I
0.836
L898_g30390
Steinernema monticolum
L898_g30390
I
0.832
PTRK_0000480700
Parastrongyloides trichosuri
PTRK_0000480700
I
0.829
SPAL_0001712900
Strongyloides papillosus
SPAL_0001712900
I
0.829
SSTP_0001253400
Strongyloides stercoralis
SSTP_0001253400
I
0.829
SVE_0146100
Strongyloides venezuelensis
SVE_0146100
I
0.829
RSKR_0000342500
Rhabditophanes kr3021
RSKR_0000342500
I
0.827
CBG02077
Caenorhabditis briggsae
CBG02077
I
0.823
CRE07549
Caenorhabditis remanei
CRE07549
I
0.823
DICVIV_12420
Dictyocaulus viviparus
DICVIV_12420
I
0.823
RSKR_0000600000
Rhabditophanes kr3021
RSKR_0000600000
N
0.823
CBN21115
Caenorhabditis brenneri
CBN21115
I
0.822
CRE09267
Caenorhabditis remanei
CRE09267
I
0.822
ACOC_0000048701
Angiostrongylus costaricensis
ACOC_0000048701
I
0.822
ANCCAN_24419
Ancylostoma caninum
ANCCAN_24419
I
0.822
TELCIR_00491
Teladorsagia circumcincta
TELCIR_00491
I
0.822
BXY_0599800
Bursaphelenchus xylophilus
BXY_0599800
I
0.819
CBN03435
Caenorhabditis brenneri
CBN03435
N
0.818
CBN19580
Caenorhabditis brenneri
CBN19580
N
0.818
L596_g702
Steinernema carpocapsae
L596_g702
I
0.818
L892_g5067
Steinernema scapterisci
L892_g5067
I
0.818
NECAME_06702
Necator americanus
NECAME_06702
I
0.817
nhr-114
Caenorhabditis elegans
WBGene00003704
N
0.812
Minc13747
Meloidogyne incognita
Minc13747
I
0.810
Minc17538
Meloidogyne incognita
Minc17538
I
0.810
GPLIN_000337500
Globodera pallida
GPLIN_000337500
I
0.810
MhA1_Contig817.frz3.gene1
Meloidogyne hapla
MhA1_Contig817.frz3.gene1
I
0.810
ANCCAN_09880
Ancylostoma caninum
ANCCAN_09880
I
0.806
GPLIN_000284100
Globodera pallida
GPLIN_000284100
I
0.804
SSTP_0001170700
Strongyloides stercoralis
SSTP_0001170700
I
0.802
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0
I
0.800
nhr-40
Caenorhabditis elegans
WBGene00003630
I
0.790
NECAME_01944
Necator americanus
NECAME_01944
I
0.790
CBN15481
Caenorhabditis brenneri
CBN15481
I
0.789
CBN28528
Caenorhabditis brenneri
CBN28528
I
0.789
CRE30787
Caenorhabditis remanei
CRE30787
I
0.788
ASU_02770
Ascaris suum
ASU_02770
I
0.786
EVEC_0000477801
Enterobius vermicularis
EVEC_0000477801
I
0.786
SMUV_0000657401
Syphacia muris
SMUV_0000657401
I
0.786
L898_g9866
Steinernema monticolum
L898_g9866
I
0.785
PTRK_0001163100
Parastrongyloides trichosuri
PTRK_0001163100
I
0.784
SPAL_0001084400
Strongyloides papillosus
SPAL_0001084400
I
0.784
SPAL_0001084500
Strongyloides papillosus
SPAL_0001084500
I
0.784
SSTP_0001035300
Strongyloides stercoralis
SSTP_0001035300
I
0.784
SVE_0956400
Strongyloides venezuelensis
SVE_0956400
I
0.784
L889_g1557
Steinernema feltiae
L889_g1557
I
0.783
CBG00093
Caenorhabditis briggsae
CBG00093
I
0.782
CBN07240
Caenorhabditis brenneri
CBN07240
I
0.782
CJA06153
Caenorhabditis japonica
CJA06153
I
0.782
CRE24074
Caenorhabditis remanei
CRE24074
I
0.782
LOAG_16377
Loa loa
LOAG_16377
I
0.782
nhr-17
Caenorhabditis elegans
WBGene00003616
I
0.782
BTMF_0000941401
Brugia timori
BTMF_0000941401
I
0.782
L596_g14199
Steinernema carpocapsae
L596_g14199
I
0.781
L892_g2422
Steinernema scapterisci
L892_g2422
I
0.781
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0
I
0.779
HPBE_0001246601
Heligmosomoides bakeri
HPBE_0001246601
I
0.779
L889_g8914
Steinernema feltiae
L889_g8914
I
0.779
L893_g22683
Steinernema glaseri
L893_g22683
I
0.779
PPA16374
Pristionchus pacificus
PPA16374
I
0.777
L893_g15045
Steinernema glaseri
L893_g15045
I
0.776
WBGene00240403
Onchocerca volvulus
WBGene00240403
I
0.775
EEL_0000989101
Elaeophora elaphi
EEL_0000989101
I
0.775
L893_g28857
Steinernema glaseri
L893_g28857
I
0.775
HCOI01525900
Haemonchus contortus
HCOI01525900
I
0.774
nhr-47
Caenorhabditis elegans
WBGene00003637
I
0.770
L889_g22425
Steinernema feltiae
L889_g22425
N
0.768
BXY_0360200
Bursaphelenchus xylophilus
BXY_0360200
I
0.766
NECAME_08394
Necator americanus
NECAME_08394
I
0.759
L596_g27472
Steinernema carpocapsae
L596_g27472
I
0.755
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.755
scaffold43-EXSNAP2012.41
Pristionchus exspectatus
scaffold43-EXSNAP2012.41
I
0.751
SPAL_0000038800
Strongyloides papillosus
SPAL_0000038800
I
0.748
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0
I
0.746
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0
I
0.746