nhr-40 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003630 T306155_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.835 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
T03G6.2a Nuclear receptor 13 82
T03G6.2b Nuclear receptor 13 82
T03G6.2c Nuclear receptor 29 98

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG02077 Caenorhabditis briggsae CBG02077 I 0.984
CBN21115 Caenorhabditis brenneri CBN21115 I 0.984
CRE07549 Caenorhabditis remanei CRE07549 I 0.984
ACOC_0000048701 Angiostrongylus costaricensis ACOC_0000048701 I 0.984
ANCCAN_24419 Ancylostoma caninum ANCCAN_24419 I 0.984
DICVIV_12420 Dictyocaulus viviparus DICVIV_12420 I 0.984
TELCIR_00491 Teladorsagia circumcincta TELCIR_00491 I 0.984
NECAME_06702 Necator americanus NECAME_06702 I 0.980
SMUV_0000795201 Syphacia muris SMUV_0000795201 I 0.973
WUBG_08038 Wuchereria bancrofti WUBG_08038 I 0.971
Bm5520 Brugia malayi Bm5520 I 0.971
LOAG_03407 Loa loa LOAG_03407 I 0.971
WBGene00240723 Onchocerca volvulus WBGene00240723 I 0.971
BTMF_0001127801 Brugia timori BTMF_0001127801 I 0.971
DME_0001010101 Dracunculus medinensis DME_0001010101 I 0.971
EEL_0000987201 Elaeophora elaphi EEL_0000987201 I 0.971
nAv.1.0.1.g02923 Acanthocheilonema viteae nAv.1.0.1.g02923 I 0.971
nOo.2.0.1.g03355 Onchocerca ochengi nOo.2.0.1.g03355 I 0.971
CBG23318 Caenorhabditis briggsae CBG23318 I 0.930
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.930
CRE26982 Caenorhabditis remanei CRE26982 I 0.929
CBN30215 Caenorhabditis brenneri CBN30215 I 0.912
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.892
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.881
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.881
ASIM_0001238601 Anisakis simplex ASIM_0001238601 N 0.880
ASU_10584 Ascaris suum ASU_10584 I 0.878
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.878
L889_g22901 Steinernema feltiae L889_g22901 I 0.878
L892_g5079 Steinernema scapterisci L892_g5079 I 0.878
L893_g15276 Steinernema glaseri L893_g15276 I 0.878
L898_g8573 Steinernema monticolum L898_g8573 I 0.878
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.875
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.869
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.869
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.865
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.865
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.862
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.860
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.858
CBG09380 Caenorhabditis briggsae CBG09380 I 0.855
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.850
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.849
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.843
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.842
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.841
CBG01866 Caenorhabditis briggsae CBG01866 I 0.835
CBN19235 Caenorhabditis brenneri CBN19235 I 0.835
CJA13458 Caenorhabditis japonica CJA13458 I 0.835
CRE03310 Caenorhabditis remanei CRE03310 I 0.835
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.835
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.835
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.835
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.835
CBG16594 Caenorhabditis briggsae CBG16594 I 0.831
CBN20518 Caenorhabditis brenneri CBN20518 I 0.831
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.831
CBN15481 Caenorhabditis brenneri CBN15481 I 0.828
CBN28528 Caenorhabditis brenneri CBN28528 I 0.828
CRE30787 Caenorhabditis remanei CRE30787 I 0.828
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.828
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.828
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.828
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.828
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.828
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.825
L893_g25227 Steinernema glaseri L893_g25227 I 0.825
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.824
ASU_12501 Ascaris suum ASU_12501 I 0.824
NECAME_00872 Necator americanus NECAME_00872 I 0.824
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.821
CRE25378 Caenorhabditis remanei CRE25378 I 0.820
L596_g702 Steinernema carpocapsae L596_g702 I 0.819
L892_g5067 Steinernema scapterisci L892_g5067 I 0.819
scaffold584-EXSNAP2012.2 Pristionchus exspectatus scaffold584-EXSNAP2012.2 I 0.819
scaffold726-EXSNAP2012.5 Pristionchus exspectatus scaffold726-EXSNAP2012.5 I 0.819
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.815
CJA01292 Caenorhabditis japonica CJA01292 I 0.811
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I 0.811
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.811
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.810
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.810
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.810
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.810
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.805
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.805
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.805
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.805
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.805
Bm5319 Brugia malayi Bm5319 I 0.804
LOAG_00300 Loa loa LOAG_00300 I 0.804
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.804
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.804
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.804
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.804
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.804
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.803
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.802
CBG00093 Caenorhabditis briggsae CBG00093 I 0.799
CJA06153 Caenorhabditis japonica CJA06153 I 0.799
CRE24074 Caenorhabditis remanei CRE24074 I 0.799
nhr-17 Caenorhabditis elegans WBGene00003616 I 0.799
CBG23319 Caenorhabditis briggsae CBG23319 I 0.794
CBN07240 Caenorhabditis brenneri CBN07240 I 0.794
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.794
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.794
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.794
L889_g7780 Steinernema feltiae L889_g7780 I 0.794
L892_g8671 Steinernema scapterisci L892_g8671 I 0.794
L898_g22454 Steinernema monticolum L898_g22454 I 0.794
CRE26981 Caenorhabditis remanei CRE26981 I 0.793
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.792
L889_g29879 Steinernema feltiae L889_g29879 I 0.792
L893_g3010 Steinernema glaseri L893_g3010 I 0.792
L898_g2764 Steinernema monticolum L898_g2764 I 0.792
CJA37776 Caenorhabditis japonica CJA37776 I 0.790
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.785
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.785
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.785
ASU_02770 Ascaris suum ASU_02770 I 0.783
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.783
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.783
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.782
L892_g2422 Steinernema scapterisci L892_g2422 I 0.782
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.779
L889_g8914 Steinernema feltiae L889_g8914 I 0.778
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.778
PPA20196 Pristionchus pacificus PPA20196 I 0.777
L893_g22683 Steinernema glaseri L893_g22683 I 0.777
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.777
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.776
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.772
L898_g30390 Steinernema monticolum L898_g30390 I 0.769
PPA16374 Pristionchus pacificus PPA16374 I 0.768
L889_g22425 Steinernema feltiae L889_g22425 N 0.764
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.758
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.757
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.757
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.757
GPLIN_000694800 Globodera pallida GPLIN_000694800 N 0.754
L893_g15045 Steinernema glaseri L893_g15045 I 0.754
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.748
ACOC_0000744201 Angiostrongylus costaricensis ACOC_0000744201 I 0.747
ANCCAN_19046 Ancylostoma caninum ANCCAN_19046 I 0.747
ANCDUO_17367 Ancylostoma duodenale ANCDUO_17367 I 0.747
DICVIV_13545 Dictyocaulus viviparus DICVIV_13545 I 0.747
HCOI00052900 Haemonchus contortus HCOI00052900 I 0.747
NECAME_01070 Necator americanus NECAME_01070 I 0.747