CRE07549 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE07549 T302078_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.886 0.643
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE07549 Nuclear receptor 29 98

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG02077 Caenorhabditis briggsae CBG02077 I 0.990
CBN21115 Caenorhabditis brenneri CBN21115 I 0.990
ACOC_0000048701 Angiostrongylus costaricensis ACOC_0000048701 I 0.990
ANCCAN_24419 Ancylostoma caninum ANCCAN_24419 I 0.990
DICVIV_12420 Dictyocaulus viviparus DICVIV_12420 I 0.990
TELCIR_00491 Teladorsagia circumcincta TELCIR_00491 I 0.990
NECAME_06702 Necator americanus NECAME_06702 I 0.987
nhr-40 Caenorhabditis elegans WBGene00003630 I 0.984
SMUV_0000795201 Syphacia muris SMUV_0000795201 I 0.982
WUBG_08038 Wuchereria bancrofti WUBG_08038 I 0.981
Bm5520 Brugia malayi Bm5520 I 0.981
LOAG_03407 Loa loa LOAG_03407 I 0.981
WBGene00240723 Onchocerca volvulus WBGene00240723 I 0.981
BTMF_0001127801 Brugia timori BTMF_0001127801 I 0.981
DME_0001010101 Dracunculus medinensis DME_0001010101 I 0.981
EEL_0000987201 Elaeophora elaphi EEL_0000987201 I 0.981
nAv.1.0.1.g02923 Acanthocheilonema viteae nAv.1.0.1.g02923 I 0.981
nOo.2.0.1.g03355 Onchocerca ochengi nOo.2.0.1.g03355 I 0.981
ASIM_0001238601 Anisakis simplex ASIM_0001238601 N 0.918
ASU_10584 Ascaris suum ASU_10584 I 0.917
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.917
L889_g22901 Steinernema feltiae L889_g22901 I 0.917
L892_g5079 Steinernema scapterisci L892_g5079 I 0.917
L893_g15276 Steinernema glaseri L893_g15276 I 0.917
L898_g8573 Steinernema monticolum L898_g8573 I 0.917
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.914
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.911
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.905
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.902
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.902
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.902
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.892
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.892
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.888
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.888
CBG01866 Caenorhabditis briggsae CBG01866 I 0.886
CBN19235 Caenorhabditis brenneri CBN19235 I 0.886
CJA13458 Caenorhabditis japonica CJA13458 I 0.886
CRE03310 Caenorhabditis remanei CRE03310 I 0.886
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.886
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.886
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.886
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.886
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.884
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.883
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.881
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.881
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.880
CBG09380 Caenorhabditis briggsae CBG09380 I 0.879
CBG23318 Caenorhabditis briggsae CBG23318 I 0.875
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.875
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.875
CRE26982 Caenorhabditis remanei CRE26982 I 0.874
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.874
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.871
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.869
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.869
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.868
Bm5319 Brugia malayi Bm5319 I 0.863
LOAG_00300 Loa loa LOAG_00300 I 0.863
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.863
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.863
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.863
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.863
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.863
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.861
CBG16594 Caenorhabditis briggsae CBG16594 I 0.859
CBN20518 Caenorhabditis brenneri CBN20518 I 0.859
CBN15481 Caenorhabditis brenneri CBN15481 I 0.856
CBN28528 Caenorhabditis brenneri CBN28528 I 0.856
CRE30787 Caenorhabditis remanei CRE30787 I 0.856
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.856
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.856
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.855
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.855
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.854
L889_g29879 Steinernema feltiae L889_g29879 I 0.854
L893_g3010 Steinernema glaseri L893_g3010 I 0.854
L898_g2764 Steinernema monticolum L898_g2764 I 0.854
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.853
ASU_12501 Ascaris suum ASU_12501 I 0.853
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.853
L893_g25227 Steinernema glaseri L893_g25227 I 0.853
NECAME_00872 Necator americanus NECAME_00872 I 0.853
CRE25378 Caenorhabditis remanei CRE25378 I 0.850
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.850
L596_g702 Steinernema carpocapsae L596_g702 I 0.848
L892_g5067 Steinernema scapterisci L892_g5067 I 0.848
CBN30215 Caenorhabditis brenneri CBN30215 I 0.846
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.842
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.841
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.841
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.841
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.841
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.835
scaffold584-EXSNAP2012.2 Pristionchus exspectatus scaffold584-EXSNAP2012.2 I 0.834
scaffold726-EXSNAP2012.5 Pristionchus exspectatus scaffold726-EXSNAP2012.5 I 0.834
CBG00093 Caenorhabditis briggsae CBG00093 I 0.831
CJA06153 Caenorhabditis japonica CJA06153 I 0.831
CRE24074 Caenorhabditis remanei CRE24074 I 0.831
nhr-17 Caenorhabditis elegans WBGene00003616 I 0.831
CBG23319 Caenorhabditis briggsae CBG23319 I 0.827
CBN07240 Caenorhabditis brenneri CBN07240 I 0.827
CJA01292 Caenorhabditis japonica CJA01292 I 0.827
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I 0.827
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.826
L889_g7780 Steinernema feltiae L889_g7780 I 0.826
L892_g8671 Steinernema scapterisci L892_g8671 I 0.826
L898_g22454 Steinernema monticolum L898_g22454 I 0.826
CJA37776 Caenorhabditis japonica CJA37776 I 0.823
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.813
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.813
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.811
CRE26981 Caenorhabditis remanei CRE26981 I 0.810
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.805
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.805
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.805
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.805
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.805
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.803
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.803
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.803
Hba_14828 Heterorhabditis bacteriophora Hba_14828 N 0.801
ASU_02770 Ascaris suum ASU_02770 I 0.800
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.800
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.800
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.799
L892_g2422 Steinernema scapterisci L892_g2422 I 0.799
L889_g8914 Steinernema feltiae L889_g8914 I 0.796
PPA20196 Pristionchus pacificus PPA20196 I 0.795
L893_g22683 Steinernema glaseri L893_g22683 I 0.795
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.795
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.790
L898_g30390 Steinernema monticolum L898_g30390 I 0.788
PPA16374 Pristionchus pacificus PPA16374 I 0.786
LOAG_16377 Loa loa LOAG_16377 I 0.782
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.782
L889_g22425 Steinernema feltiae L889_g22425 N 0.782
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.782
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.777
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.776
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.776
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.776
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.774
L893_g15045 Steinernema glaseri L893_g15045 I 0.773
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.767
ACOC_0000744201 Angiostrongylus costaricensis ACOC_0000744201 I 0.766
ANCCAN_19046 Ancylostoma caninum ANCCAN_19046 I 0.766
ANCDUO_17367 Ancylostoma duodenale ANCDUO_17367 I 0.766
DICVIV_13545 Dictyocaulus viviparus DICVIV_13545 I 0.766
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.766
HCOI00052900 Haemonchus contortus HCOI00052900 I 0.766
NECAME_01070 Necator americanus NECAME_01070 I 0.766
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.766
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.766
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.766
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.763
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.762
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.761
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.758
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.758
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.758
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.758
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.758
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.757
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.757