CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g30390
(
Steinernema monticolum
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L898_g30390
T309486_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.821
0.543
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.796
0.586
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g30390.t1
Nuclear receptor
58
127
ELCVVCGDTASGIHYGVASCNGCKTFFRRVVIENKRYSCKASGKCLVDKKMRCGCRYCRYKKCIAVGMDP
Links
Other
Nuclear receptor
family TFs
Other
Steinernema monticolum
TFs
196 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g8914
Steinernema feltiae
L889_g8914
I
0.986
L893_g22683
Steinernema glaseri
L893_g22683
I
0.986
L889_g22425
Steinernema feltiae
L889_g22425
N
0.985
L893_g15045
Steinernema glaseri
L893_g15045
I
0.982
L596_g14199
Steinernema carpocapsae
L596_g14199
I
0.980
L892_g2422
Steinernema scapterisci
L892_g2422
I
0.980
PPA16374
Pristionchus pacificus
PPA16374
I
0.966
L596_g702
Steinernema carpocapsae
L596_g702
I
0.964
L892_g5067
Steinernema scapterisci
L892_g5067
I
0.964
PTRK_0001163100
Parastrongyloides trichosuri
PTRK_0001163100
I
0.959
SPAL_0001084400
Strongyloides papillosus
SPAL_0001084400
I
0.959
SPAL_0001084500
Strongyloides papillosus
SPAL_0001084500
I
0.959
SSTP_0001035300
Strongyloides stercoralis
SSTP_0001035300
I
0.959
SVE_0956400
Strongyloides venezuelensis
SVE_0956400
I
0.959
ASU_02770
Ascaris suum
ASU_02770
I
0.955
EVEC_0000477801
Enterobius vermicularis
EVEC_0000477801
I
0.955
SMUV_0000657401
Syphacia muris
SMUV_0000657401
I
0.955
PPA20196
Pristionchus pacificus
PPA20196
I
0.953
scaffold290-EXSNAP2012.30
Pristionchus exspectatus
scaffold290-EXSNAP2012.30
I
0.953
BXY_0988800
Bursaphelenchus xylophilus
BXY_0988800
I
0.944
CBG00093
Caenorhabditis briggsae
CBG00093
I
0.929
CBN07240
Caenorhabditis brenneri
CBN07240
I
0.929
CJA06153
Caenorhabditis japonica
CJA06153
I
0.929
CRE24074
Caenorhabditis remanei
CRE24074
I
0.929
nhr-17
Caenorhabditis elegans
WBGene00003616
I
0.929
scaffold584-EXSNAP2012.2
Pristionchus exspectatus
scaffold584-EXSNAP2012.2
I
0.926
scaffold726-EXSNAP2012.5
Pristionchus exspectatus
scaffold726-EXSNAP2012.5
I
0.926
ACOC_0000744201
Angiostrongylus costaricensis
ACOC_0000744201
I
0.921
ANCCAN_19046
Ancylostoma caninum
ANCCAN_19046
I
0.921
ANCDUO_17367
Ancylostoma duodenale
ANCDUO_17367
I
0.921
DICVIV_13545
Dictyocaulus viviparus
DICVIV_13545
I
0.921
HCOI00052900
Haemonchus contortus
HCOI00052900
I
0.921
NECAME_01070
Necator americanus
NECAME_01070
I
0.921
PEQ_0000894301
Parascaris equorum
PEQ_0000894301
I
0.909
CJA01292
Caenorhabditis japonica
CJA01292
I
0.905
CRE26981
Caenorhabditis remanei
CRE26981
I
0.905
CBG23319
Caenorhabditis briggsae
CBG23319
I
0.885
nhr-101
Caenorhabditis elegans
WBGene00003691
I
0.869
CBG23318
Caenorhabditis briggsae
CBG23318
I
0.864
nhr-68
Caenorhabditis elegans
WBGene00003658
I
0.864
CRE26982
Caenorhabditis remanei
CRE26982
I
0.863
CBN30215
Caenorhabditis brenneri
CBN30215
I
0.854
SMUV_0000795201
Syphacia muris
SMUV_0000795201
I
0.853
WUBG_08038
Wuchereria bancrofti
WUBG_08038
I
0.850
Bm5520
Brugia malayi
Bm5520
I
0.850
LOAG_03407
Loa loa
LOAG_03407
I
0.850
WBGene00240723
Onchocerca volvulus
WBGene00240723
I
0.850
BTMF_0001127801
Brugia timori
BTMF_0001127801
I
0.850
DME_0001010101
Dracunculus medinensis
DME_0001010101
I
0.850
EEL_0000987201
Elaeophora elaphi
EEL_0000987201
I
0.850
nAv.1.0.1.g02923
Acanthocheilonema viteae
nAv.1.0.1.g02923
I
0.850
nOo.2.0.1.g03355
Onchocerca ochengi
nOo.2.0.1.g03355
I
0.850
DME_0000693601
Dracunculus medinensis
DME_0000693601
I
0.834
Ppa-nhr-3
Pristionchus pacificus
PPA28597
I
0.833
scaffold395-EXSNAP2012.23
Pristionchus exspectatus
scaffold395-EXSNAP2012.23
I
0.833
CJA37776
Caenorhabditis japonica
CJA37776
I
0.832
WBGene00236987
Onchocerca volvulus
WBGene00236987
I
0.828
nOo.2.0.1.g02345
Onchocerca ochengi
nOo.2.0.1.g02345
I
0.828
NECAME_01944
Necator americanus
NECAME_01944
I
0.826
TCLT_0000461101
Thelazia callipaeda
TCLT_0000461101
I
0.825
SPAL_0001238400
Strongyloides papillosus
SPAL_0001238400
I
0.823
SVE_0697700
Strongyloides venezuelensis
SVE_0697700
I
0.823
CBG03844
Caenorhabditis briggsae
CBG03844
I
0.821
CBN18198
Caenorhabditis brenneri
CBN18198
I
0.821
CBN20749
Caenorhabditis brenneri
CBN20749
I
0.821
CRE08259
Caenorhabditis remanei
CRE08259
I
0.821
nhr-49
Caenorhabditis elegans
WBGene00003639
D
0.821
ASU_03870
Ascaris suum
ASU_03870
I
0.821
GPLIN_001175700
Globodera pallida
GPLIN_001175700
I
0.821
PEQ_0000391501
Parascaris equorum
PEQ_0000391501
I
0.821
scaffold605-EXSNAP2012.9
Pristionchus exspectatus
scaffold605-EXSNAP2012.9
I
0.821
LOAG_08615
Loa loa
LOAG_08615
I
0.819
DME_0000591901
Dracunculus medinensis
DME_0000591901
I
0.819
ANCCAN_09880
Ancylostoma caninum
ANCCAN_09880
I
0.817
EVEC_0001313601
Enterobius vermicularis
EVEC_0001313601
I
0.817
HCOI01525900
Haemonchus contortus
HCOI01525900
I
0.817
L893_g13285
Steinernema glaseri
L893_g13285
I
0.816
PTRK_0000320200
Parastrongyloides trichosuri
PTRK_0000320200
N
0.816
HPBE_0001246601
Heligmosomoides bakeri
HPBE_0001246601
I
0.815
L596_g11035
Steinernema carpocapsae
L596_g11035
I
0.815
Ppa-nhr-120
Pristionchus pacificus
PPA00183
I
0.813
PTRK_0001312000
Parastrongyloides trichosuri
PTRK_0001312000
I
0.813
scaffold384-EXSNAP2012.4
Pristionchus exspectatus
scaffold384-EXSNAP2012.4
I
0.813
scaffold572-EXSNAP2012.7
Pristionchus exspectatus
scaffold572-EXSNAP2012.7
I
0.813
ANCCAN_14103
Ancylostoma caninum
ANCCAN_14103
I
0.812
ANCCAN_17081
Ancylostoma caninum
ANCCAN_17081
I
0.812
HCOI00601000
Haemonchus contortus
HCOI00601000
I
0.812
HPLM_0000564201
Haemonchus placei
HPLM_0000564201
I
0.812
EVEC_0000027301
Enterobius vermicularis
EVEC_0000027301
I
0.811
nhr-10
Caenorhabditis elegans
WBGene00003609
I
0.810
L596_g23777
Steinernema carpocapsae
L596_g23777
I
0.810
L893_g25227
Steinernema glaseri
L893_g25227
I
0.810
ALUE_0002179401
Ascaris lumbricoides
ALUE_0002179401
I
0.809
ASU_12501
Ascaris suum
ASU_12501
I
0.809
NECAME_00872
Necator americanus
NECAME_00872
I
0.809
SVE_1749000
Strongyloides venezuelensis
SVE_1749000
I
0.809
CRE30787
Caenorhabditis remanei
CRE30787
I
0.808
SSTP_0000408200
Strongyloides stercoralis
SSTP_0000408200
I
0.808
CBN15481
Caenorhabditis brenneri
CBN15481
I
0.807
CBN28528
Caenorhabditis brenneri
CBN28528
I
0.807
SPAL_0000231300
Strongyloides papillosus
SPAL_0000231300
I
0.807
SPAL_0000490500
Strongyloides papillosus
SPAL_0000490500
I
0.807
SVE_1951500
Strongyloides venezuelensis
SVE_1951500
I
0.807
PTRK_0001020800
Parastrongyloides trichosuri
PTRK_0001020800
I
0.806
SPAL_0001099500
Strongyloides papillosus
SPAL_0001099500
I
0.806
SSTP_0000769100
Strongyloides stercoralis
SSTP_0000769100
I
0.806
SVE_0858700
Strongyloides venezuelensis
SVE_0858700
I
0.806
RSKR_0000342500
Rhabditophanes kr3021
RSKR_0000342500
I
0.805
SPAL_0001637600
Strongyloides papillosus
SPAL_0001637600
I
0.804
SSTP_0000055100
Strongyloides stercoralis
SSTP_0000055100
I
0.804
SVE_0429000
Strongyloides venezuelensis
SVE_0429000
I
0.804
Bm4980
Brugia malayi
Bm4980
I
0.801
BTMF_0000217201
Brugia timori
BTMF_0000217201
I
0.801
PTRK_0000994100
Parastrongyloides trichosuri
PTRK_0000994100
I
0.800
SSTP_0000381700
Strongyloides stercoralis
SSTP_0000381700
N
0.798
CBG01866
Caenorhabditis briggsae
CBG01866
I
0.796
CBN19235
Caenorhabditis brenneri
CBN19235
I
0.796
CJA13458
Caenorhabditis japonica
CJA13458
I
0.796
CRE03310
Caenorhabditis remanei
CRE03310
I
0.796
nhr-1
Caenorhabditis elegans
WBGene00003600
D
0.796
ANCCEY_01961
Ancylostoma ceylanicum
ANCCEY_01961
I
0.796
HCOI01554200
Haemonchus contortus
HCOI01554200
I
0.796
HPBE_0000837301
Heligmosomoides bakeri
HPBE_0000837301
I
0.796
MhA1_Contig2491.frz3.gene4
Meloidogyne hapla
MhA1_Contig2491.frz3.gene4
I
0.795
PTRK_0000194200
Parastrongyloides trichosuri
PTRK_0000194200
I
0.795
SMUV_0000708401
Syphacia muris
SMUV_0000708401
I
0.794
CBG16594
Caenorhabditis briggsae
CBG16594
I
0.791
CBN20518
Caenorhabditis brenneri
CBN20518
I
0.791
CRE25378
Caenorhabditis remanei
CRE25378
I
0.791
nhr-47
Caenorhabditis elegans
WBGene00003637
I
0.791
ACOC_0000869501
Angiostrongylus costaricensis
ACOC_0000869501
I
0.791
HPBE_0001154501
Heligmosomoides bakeri
HPBE_0001154501
I
0.791
PTRK_0000720500
Parastrongyloides trichosuri
PTRK_0000720500
I
0.791
SPAL_0000841700
Strongyloides papillosus
SPAL_0000841700
I
0.791
SSTP_0000145700
Strongyloides stercoralis
SSTP_0000145700
I
0.791
SVE_1799100
Strongyloides venezuelensis
SVE_1799100
I
0.791
ASU_10584
Ascaris suum
ASU_10584
I
0.790
L596_g19151
Steinernema carpocapsae
L596_g19151
I
0.790
L889_g22901
Steinernema feltiae
L889_g22901
I
0.790
L892_g5079
Steinernema scapterisci
L892_g5079
I
0.790
L893_g15276
Steinernema glaseri
L893_g15276
I
0.790
L898_g8573
Steinernema monticolum
L898_g8573
I
0.790
CBG02077
Caenorhabditis briggsae
CBG02077
I
0.788
CBN21115
Caenorhabditis brenneri
CBN21115
I
0.788
CRE07549
Caenorhabditis remanei
CRE07549
I
0.788
ACOC_0000048701
Angiostrongylus costaricensis
ACOC_0000048701
I
0.788
ACOC_0000700901
Angiostrongylus costaricensis
ACOC_0000700901
I
0.788
ANCCAN_24419
Ancylostoma caninum
ANCCAN_24419
I
0.788
BXY_0360200
Bursaphelenchus xylophilus
BXY_0360200
I
0.788
DICVIV_09815
Dictyocaulus viviparus
DICVIV_09815
I
0.788
DICVIV_12420
Dictyocaulus viviparus
DICVIV_12420
I
0.788
TELCIR_00491
Teladorsagia circumcincta
TELCIR_00491
I
0.788
BXY_1057600
Bursaphelenchus xylophilus
BXY_1057600
I
0.787
BXY_0599800
Bursaphelenchus xylophilus
BXY_0599800
I
0.786
Bm5319
Brugia malayi
Bm5319
I
0.783
LOAG_00300
Loa loa
LOAG_00300
I
0.783
BTMF_0001388101
Brugia timori
BTMF_0001388101
I
0.783
L596_g12321
Steinernema carpocapsae
L596_g12321
I
0.783
L889_g29879
Steinernema feltiae
L889_g29879
I
0.783
L893_g3010
Steinernema glaseri
L893_g3010
I
0.783
L898_g2764
Steinernema monticolum
L898_g2764
I
0.783
nDi.2.2.2.g02318
Dirofilaria immitis
nDi.2.2.2.g02318
I
0.783
nOo.2.0.1.g01530
Onchocerca ochengi
nOo.2.0.1.g01530
I
0.783
OFLC_0001450101
Onchocerca flexuosa
OFLC_0001450101
I
0.783
TCLT_0000399401
Thelazia callipaeda
TCLT_0000399401
I
0.783
SMUV_0000475001
Syphacia muris
SMUV_0000475001
I
0.782
ACAC_0001297301
Angiostrongylus cantonensis
ACAC_0001297301
I
0.781
BXY_0631600
Bursaphelenchus xylophilus
BXY_0631600
I
0.781
SSTP_0000546600
Strongyloides stercoralis
SSTP_0000546600
I
0.780
scaffold314-EXSNAP2012.19
Pristionchus exspectatus
scaffold314-EXSNAP2012.19
I
0.776
HCOI00673400
Haemonchus contortus
HCOI00673400
I
0.773
HCOI01687000
Haemonchus contortus
HCOI01687000
I
0.773
L596_g12276
Steinernema carpocapsae
L596_g12276
I
0.773
L889_g7780
Steinernema feltiae
L889_g7780
I
0.773
L892_g8671
Steinernema scapterisci
L892_g8671
I
0.773
L898_g22454
Steinernema monticolum
L898_g22454
I
0.773
NBR_0001576001
Nippostrongylus brasiliensis
NBR_0001576001
I
0.773
WBGene00241993
Onchocerca volvulus
WBGene00241993
I
0.771
L889_g17247
Steinernema feltiae
L889_g17247
I
0.770
L898_g26357
Steinernema monticolum
L898_g26357
I
0.770
nhr-40
Caenorhabditis elegans
WBGene00003630
I
0.769
PTRK_0000480700
Parastrongyloides trichosuri
PTRK_0000480700
I
0.769
SPAL_0001712900
Strongyloides papillosus
SPAL_0001712900
I
0.769
SSTP_0001253400
Strongyloides stercoralis
SSTP_0001253400
I
0.769
SVE_0146100
Strongyloides venezuelensis
SVE_0146100
I
0.769
GPLIN_000337500
Globodera pallida
GPLIN_000337500
I
0.768
CRE09109
Caenorhabditis remanei
CRE09109
I
0.767
PPA24481
Pristionchus pacificus
PPA24481
I
0.766
scaffold552-EXSNAP2012.17
Pristionchus exspectatus
scaffold552-EXSNAP2012.17
I
0.766
ASIM_0001308601
Anisakis simplex
ASIM_0001308601
I
0.761
RSKR_0001171300
Rhabditophanes kr3021
RSKR_0001171300
I
0.753
DICVIV_03784
Dictyocaulus viviparus
DICVIV_03784
I
0.752
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0
I
0.750
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0
I
0.750
MhA1_Contig320.frz3.gene45
Meloidogyne hapla
MhA1_Contig320.frz3.gene45
I
0.750
NECAME_06702
Necator americanus
NECAME_06702
I
0.747