scaffold395-EXSNAP2012.23 (Pristionchus exspectatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 scaffold395-EXSNAP2012.23 T310253_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.817 0.514
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.802 0.571
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.802 0.571
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.782 0.543
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.782 0.543
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.782 0.543
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.782 0.543
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.755 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold395-EXSNAP2012.23 Nuclear receptor 39 108

Links

Other Nuclear receptor family TFs
Other Pristionchus exspectatus TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.992
CBG14996 Caenorhabditis briggsae CBG14996 I 0.892
ENSONIG00000015396 Oreochromis niloticus ENSONIG00000015396 I 0.866
CRE09416 Caenorhabditis remanei CRE09416 I 0.865
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.851
L892_g2422 Steinernema scapterisci L892_g2422 I 0.851
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.843
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.836
CRE07034 Caenorhabditis remanei CRE07034 I 0.833
L898_g30390 Steinernema monticolum L898_g30390 I 0.833
L889_g22425 Steinernema feltiae L889_g22425 N 0.825
DAPPUDRAFT_106791 Daphnia pulex DAPPUDRAFT_106791 I 0.823
L889_g8914 Steinernema feltiae L889_g8914 I 0.822
L893_g22683 Steinernema glaseri L893_g22683 I 0.822
nr2e3 Oryzias latipes ENSORLG00000007175 I 0.821
ENSPFOG00000006516 Poecilia formosa ENSPFOG00000006516 I 0.821
ENSXMAG00000015842 Xiphophorus maculatus ENSXMAG00000015842 I 0.821
CBG22587 Caenorhabditis briggsae CBG22587 I 0.820
CRE07033 Caenorhabditis remanei CRE07033 I 0.820
CRE10779 Caenorhabditis remanei CRE10779 I 0.820
CJA18307 Caenorhabditis japonica CJA18307 I 0.817
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.817
ASU_00971 Ascaris suum ASU_00971 I 0.817
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.817
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.817
tetur01g11040 Tetranychus urticae tetur01g11040 I 0.816
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.809
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.809
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.809
NECAME_02375 Necator americanus NECAME_02375 I 0.809
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.809
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.807
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.807
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.807
AAEL007190 Aedes aegypti AAEL007190 I 0.806
e_gw.107.44.1 Branchiostoma floridae e_gw.107.44.1 I 0.805
e_gw.324.28.1 Branchiostoma floridae e_gw.324.28.1 I 0.805
CJA14248 Caenorhabditis japonica CJA14248 I 0.804
ACYPI007601 Acyrthosiphon pisum ACYPI007601 I 0.803
ADAC006988 Anopheles darlingi ADAC006988 I 0.803
EFV56045 Trichinella spiralis EFV56045 I 0.803
nr2e3 Danio rerio ENSDARG00000045904 I 0.803
AALB001133 Anopheles albimanus AALB001133 I 0.803
AARA003887 Anopheles arabiensis AARA003887 I 0.803
AATE003142 Anopheles atroparvus AATE003142 I 0.803
ACOM026748 Anopheles coluzzii ACOM026748 I 0.803
AEPI011067 Anopheles epiroticus AEPI011067 I 0.803
AFAF011447 Anopheles farauti AFAF011447 I 0.803
AMEM000983 Anopheles merus AMEM000983 I 0.803
D917_05007 Trichinella nativa D917_05007 I 0.803
ENSMEUG00000016597 Macropus eugenii ENSMEUG00000016597 I 0.802
NR2E3 Monodelphis domestica ENSMODG00000001949 I 0.802
Hr51 Drosophila melanogaster FBgn0034012 D 0.802
GF13031 Drosophila ananassae FBgn0090064 I 0.802
GH20426 Drosophila grimshawi FBgn0127889 I 0.802
GI19610 Drosophila mojavensis FBgn0142347 I 0.802
GL17752 Drosophila persimilis FBgn0155355 I 0.802
GD11109 Drosophila simulans FBgn0182865 I 0.802
GJ14974 Drosophila virilis FBgn0202177 I 0.802
GK20892 Drosophila willistoni FBgn0222886 I 0.802
GE13645 Drosophila yakuba FBgn0231304 I 0.802
GA30480 Drosophila pseudoobscura FBgn0264774 D 0.802
GB49738 Apis mellifera GB49738 I 0.802
L798_02234 Zootermopsis nevadensis L798_02234 I 0.802
NV14480 Nasonia vitripennis NV14480 I 0.802
PHUM039420 Pediculus humanus PHUM039420 I 0.802
RPRC002557 Rhodnius prolixus RPRC002557 I 0.802
TC009378 Tribolium castaneum TC009378 I 0.802
Hsal_07902--XP_396999.3_APIME Harpegnathos saltator Hsal_07902--XP_396999.3_APIME I 0.802
LDEC022044 Leptinotarsa decemlineata LDEC022044 I 0.802
MDOA010244 Musca domestica MDOA010244 I 0.802
CGI_10007932 Crassostrea gigas CGI_10007932 I 0.801
NR2E3 Anolis carolinensis ENSACAG00000011910 I 0.801
ENSAMXG00000017872 Astyanax mexicanus ENSAMXG00000017872 I 0.801
NR2E3 Gasterosteus aculeatus ENSGACG00000017060 I 0.801
ENSGMOG00000019194 Gadus morhua ENSGMOG00000019194 I 0.801
ENSLACG00000022378 Latimeria chalumnae ENSLACG00000022378 I 0.801
ENSLOCG00000014973 Lepisosteus oculatus ENSLOCG00000014973 I 0.801
ENSONIG00000007109 Oreochromis niloticus ENSONIG00000007109 I 0.801
NR2E3 Oryzias latipes ENSORLG00000000011 I 0.801
ENSPFOG00000006106 Poecilia formosa ENSPFOG00000006106 I 0.801
NR2E3 Takifugu rubripes ENSTRUG00000015582 I 0.801
ENSXMAG00000010311 Xiphophorus maculatus ENSXMAG00000010311 I 0.801
HelroG139475 Helobdella robusta HelroG139475 I 0.801
LotgiG137595 Lottia gigantea LotgiG137595 I 0.801
Alligator_sinensis_CCG020979.1 Alligator sinensis Alligator_sinensis_CCG020979.1 I 0.801
Cmyd_10012017 Chelonia mydas Cmyd_10012017 I 0.801
Ogr12843 Ophisaurus gracilis Ogr12843 I 0.801
Pvit_13689 Pogona vitticeps Pvit_13689 I 0.801
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.801
nr2e3 Xenopus tropicalis XB-GENE-485801 I 0.800
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.800
L889_g31970 Steinernema feltiae L889_g31970 I 0.800
L893_g263 Steinernema glaseri L893_g263 I 0.800
L898_g11608 Steinernema monticolum L898_g11608 I 0.800
PPA29597 Pristionchus pacificus PPA29597 I 0.799
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.795
L893_g15045 Steinernema glaseri L893_g15045 I 0.793
NR2E3 Tupaia belangeri ENSTBEG00000011672 I 0.790
CBG14155 Caenorhabditis briggsae CBG14155 I 0.789
CBN22518 Caenorhabditis brenneri CBN22518 I 0.789
CJA07370 Caenorhabditis japonica CJA07370 I 0.789
CRE00427 Caenorhabditis remanei CRE00427 I 0.789
fax-1 Caenorhabditis elegans WBGene00001400 I 0.789
SMU15029049 Schmidtea mediterranea SMU15029049 I 0.789
SMU15038222 Schmidtea mediterranea SMU15038222 I 0.789
HCOI01781300 Haemonchus contortus HCOI01781300 I 0.789
SPAL_0001117000 Strongyloides papillosus SPAL_0001117000 I 0.789
SSTP_0000090600 Strongyloides stercoralis SSTP_0000090600 I 0.789
SVE_0933400 Strongyloides venezuelensis SVE_0933400 I 0.789
D918_07443 Trichuris suis D918_07443 I 0.787
ECPE_0000243601 Echinostoma caproni ECPE_0000243601 I 0.787
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.787
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.787
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.787
TTRE_0000600201 Trichuris trichiura TTRE_0000600201 I 0.787
Bm4485 Brugia malayi Bm4485 I 0.785
LOAG_06205 Loa loa LOAG_06205 I 0.785
WBGene00240517 Onchocerca volvulus WBGene00240517 I 0.785
ANCCAN_05510 Ancylostoma caninum ANCCAN_05510 I 0.785
ANCCEY_01724 Ancylostoma ceylanicum ANCCEY_01724 I 0.785
ASU_07884 Ascaris suum ASU_07884 I 0.785
BTMF_0001091401 Brugia timori BTMF_0001091401 I 0.785
BXY_0327700 Bursaphelenchus xylophilus BXY_0327700 I 0.785
CGOC_0000187501 Cylicostephanus goldi CGOC_0000187501 I 0.785
DICVIV_11193 Dictyocaulus viviparus DICVIV_11193 I 0.785
GPLIN_000669800 Globodera pallida GPLIN_000669800 I 0.785
Hba_15323 Heterorhabditis bacteriophora Hba_15323 I 0.785
nLs.2.1.2.g01701 Litomosoides sigmodontis nLs.2.1.2.g01701 I 0.785
nOo.2.0.1.g01040 Onchocerca ochengi nOo.2.0.1.g01040 I 0.785
nOo.2.0.1.g10097 Onchocerca ochengi nOo.2.0.1.g10097 I 0.785
nOo.2.0.1.g11611 Onchocerca ochengi nOo.2.0.1.g11611 I 0.785
OFLC_0000991001 Onchocerca flexuosa OFLC_0000991001 I 0.785
SBAD_0000006401 Soboliphyme baturini SBAD_0000006401 I 0.785
TCNE_0001716001 Toxocara canis TCNE_0001716001 I 0.785
nr2e3 Gasterosteus aculeatus ENSGACG00000004739 I 0.784
CapteG171557 Capitella teleta CapteG171557 I 0.783
ENSFALG00000009699 Ficedula albicollis ENSFALG00000009699 I 0.783
NR2E3 Gallus gallus ENSGALG00000002093 I 0.783
ENSTGUG00000004498 Taeniopygia guttata ENSTGUG00000004498 I 0.783
Aan_R004022 Calypte anna Aan_R004022 I 0.783
Afo_R007066 Aptenodytes forsteri Afo_R007066 I 0.783
Gfo_R008863 Geospiza fortis Gfo_R008863 I 0.783
BGLB004019 Biomphalaria glabrata BGLB004019 I 0.783
NR2E3 Bos taurus ENSBTAG00000014236 I 0.782
NR2E3 Callithrix jacchus ENSCJAG00000018552 I 0.782
NR2E3 Cavia porcellus ENSCPOG00000008974 I 0.782
ENSCSAG00000013721 Chlorocebus sabaeus ENSCSAG00000013721 I 0.782
NR2E3 Equus caballus ENSECAG00000015192 I 0.782
NR2E3 Felis catus ENSFCAG00000031082 I 0.782
NR2E3 Homo sapiens ENSG00000278570 D 0.782
NR2E3 Gorilla gorilla ENSGGOG00000004383 I 0.782
NR2E3 Myotis lucifugus ENSMLUG00000008408 I 0.782
NR2E3 Macaca mulatta ENSMMUG00000019276 I 0.782
ENSMPUG00000017103 Mustela putorius furo ENSMPUG00000017103 I 0.782
Nr2e3 Mus musculus ENSMUSG00000032292 D 0.782
ENSNLEG00000013807 Nomascus leucogenys ENSNLEG00000013807 I 0.782
ENSOARG00000018808 Ovis aries ENSOARG00000018808 I 0.782
NR2E3 Otolemur garnettii ENSOGAG00000006128 I 0.782
NR2E3 Ochotona princeps ENSOPRG00000006427 I 0.782
ENSPANG00000016257 Papio anubis ENSPANG00000016257 I 0.782
NR2E3 Procavia capensis ENSPCAG00000014733 I 0.782
NR2E3 Pan troglodytes ENSPTRG00000007242 I 0.782
NR2E3 Pteropus vampyrus ENSPVAG00000009088 I 0.782
Nr2e3 Rattus norvegicus ENSRNOG00000050690 I 0.782
ENSSTOG00000012080 Ictidomys tridecemlineatus ENSSTOG00000012080 I 0.782
NR2E3 Tursiops truncatus ENSTTRG00000009410 I 0.782
ENSBTAP00000048604-D1 Bos grunniens ENSBTAP00000048604-D1 I 0.782
Myotis_brandtii_NR2E3_10027281 Myotis brandtii Myotis_brandtii_NR2E3_10027281 I 0.782
RSKR_0000698500 Rhabditophanes kr3021 RSKR_0000698500 I 0.782
L596_g702 Steinernema carpocapsae L596_g702 I 0.775
L892_g5067 Steinernema scapterisci L892_g5067 I 0.775
NR2E3 Sus scrofa ENSSSCG00000004978 I 0.772
PTRK_0000446300 Parastrongyloides trichosuri PTRK_0000446300 I 0.771
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.770
L892_g3438 Steinernema scapterisci L892_g3438 I 0.770
L898_g9613 Steinernema monticolum L898_g9613 I 0.770
csin100859 Clonorchis sinensis csin100859 I 0.769
Smp_167770 Schistosoma mansoni Smp_167770 I 0.768
SMRZ_0000841101 Schistosoma margrebowiei SMRZ_0000841101 I 0.768
SMTD_0001566201 Schistosoma mattheei SMTD_0001566201 I 0.768
TRE_0000223201 Trichobilharzia regenti TRE_0000223201 I 0.768
SPU_014405 Strongylocentrotus purpuratus SPU_014405 I 0.767
nAv.1.0.1.g01891 Acanthocheilonema viteae nAv.1.0.1.g01891 I 0.767
TCLT_0000456401 Thelazia callipaeda TCLT_0000456401 I 0.767
genemark-nMf.1.1.scaf00188-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00188-processed-gene-0.4 I 0.766
L596_g2163 Steinernema carpocapsae L596_g2163 I 0.766
L889_g11978 Steinernema feltiae L889_g11978 I 0.766
L892_g9366 Steinernema scapterisci L892_g9366 I 0.766
L893_g28297 Steinernema glaseri L893_g28297 I 0.766
L898_g15355 Steinernema monticolum L898_g15355 I 0.766
MhA1_Contig1792.frz3.gene6 Meloidogyne hapla MhA1_Contig1792.frz3.gene6 I 0.766
nDi.2.2.2.g10236 Dirofilaria immitis nDi.2.2.2.g10236 I 0.766
L889_g15424 Steinernema feltiae L889_g15424 I 0.765
L893_g33656 Steinernema glaseri L893_g33656 I 0.765
Ppa-fax-1 Pristionchus pacificus PPA00264 I 0.764
Sakowv30007027m.g Saccoglossus kowalevskii Sakowv30007027m.g I 0.764
scaffold296-EXSNAP2012.8 Pristionchus exspectatus scaffold296-EXSNAP2012.8 I 0.764
CRE07035 Caenorhabditis remanei CRE07035 I 0.759
ENSGMOG00000008342 Gadus morhua ENSGMOG00000008342 I 0.759
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.759
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.759
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.759
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.759
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.759
CBG03860 Caenorhabditis briggsae CBG03860 I 0.757
CBN05776 Caenorhabditis brenneri CBN05776 I 0.757
CJA19445 Caenorhabditis japonica CJA19445 I 0.757
CRE08264 Caenorhabditis remanei CRE08264 I 0.757
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.757
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.757
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.757
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.757
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.757
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.753
Minc01725 Meloidogyne incognita Minc01725 I 0.753
Minc13525 Meloidogyne incognita Minc13525 I 0.753
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.753
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.753
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.753
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.753
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.753
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.753
CBN00088 Caenorhabditis brenneri CBN00088 I 0.751
CBN21958 Caenorhabditis brenneri CBN21958 I 0.751
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.751
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.750
NECAME_01944 Necator americanus NECAME_01944 I 0.748
SMU15028943 Schmidtea mediterranea SMU15028943 I 0.746