SMUV_0000230901 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0000230901 T310403_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.987 0.900
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.796 0.557
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.772 0.543
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.772 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000230901-mRNA-1 Nuclear receptor 24 93

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASU_00971 Ascaris suum ASU_00971 I 0.988
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.988
CBG22587 Caenorhabditis briggsae CBG22587 I 0.987
CRE07033 Caenorhabditis remanei CRE07033 I 0.987
CRE10779 Caenorhabditis remanei CRE10779 I 0.987
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.987
CJA14248 Caenorhabditis japonica CJA14248 I 0.986
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.986
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.986
L889_g31970 Steinernema feltiae L889_g31970 I 0.986
L893_g263 Steinernema glaseri L893_g263 I 0.986
L898_g11608 Steinernema monticolum L898_g11608 I 0.986
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.986
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.986
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.986
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.986
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.986
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.986
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.985
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.985
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.985
NECAME_02375 Necator americanus NECAME_02375 I 0.985
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.985
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.984
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.981
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.975
CRE09416 Caenorhabditis remanei CRE09416 I 0.970
CBG14996 Caenorhabditis briggsae CBG14996 I 0.962
CRE07035 Caenorhabditis remanei CRE07035 I 0.961
CJA02727 Caenorhabditis japonica CJA02727 I 0.955
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.955
CBG13142 Caenorhabditis briggsae CBG13142 I 0.954
CBN04415 Caenorhabditis brenneri CBN04415 I 0.954
CBN32300 Caenorhabditis brenneri CBN32300 I 0.954
CRE26423 Caenorhabditis remanei CRE26423 I 0.954
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.952
CBG14997 Caenorhabditis briggsae CBG14997 I 0.945
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.945
CBN00088 Caenorhabditis brenneri CBN00088 I 0.942
CBN21958 Caenorhabditis brenneri CBN21958 I 0.942
CJA18307 Caenorhabditis japonica CJA18307 I 0.942
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.940
L889_g366 Steinernema feltiae L889_g366 I 0.940
L892_g17832 Steinernema scapterisci L892_g17832 I 0.940
L893_g5404 Steinernema glaseri L893_g5404 I 0.940
L889_g15424 Steinernema feltiae L889_g15424 I 0.934
L892_g3438 Steinernema scapterisci L892_g3438 I 0.934
L893_g33656 Steinernema glaseri L893_g33656 I 0.934
L898_g9613 Steinernema monticolum L898_g9613 I 0.934
CRE07034 Caenorhabditis remanei CRE07034 I 0.933
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.933
CBG03466 Caenorhabditis briggsae CBG03466 I 0.928
CBN28641 Caenorhabditis brenneri CBN28641 I 0.928
CJA14611 Caenorhabditis japonica CJA14611 I 0.928
CJA19445 Caenorhabditis japonica CJA19445 I 0.928
CRE29874 Caenorhabditis remanei CRE29874 I 0.928
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.928
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.928
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.928
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.928
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.928
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.928
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.928
CBG03860 Caenorhabditis briggsae CBG03860 I 0.927
CBN05776 Caenorhabditis brenneri CBN05776 I 0.927
CRE08264 Caenorhabditis remanei CRE08264 I 0.927
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.927
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.927
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.927
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.927
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.926
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.926
L889_g16305 Steinernema feltiae L889_g16305 I 0.926
L892_g17146 Steinernema scapterisci L892_g17146 I 0.926
L893_g6565 Steinernema glaseri L893_g6565 I 0.926
L898_g5338 Steinernema monticolum L898_g5338 I 0.926
CJA39530 Caenorhabditis japonica CJA39530 I 0.924
nhr-100 Caenorhabditis elegans WBGene00003690 I 0.923
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.919
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.909
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.907
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.905
L892_g23093 Steinernema scapterisci L892_g23093 I 0.905
L898_g32368 Steinernema monticolum L898_g32368 I 0.904
L889_g2977 Steinernema feltiae L889_g2977 I 0.903
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.900
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.897
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.893
CRE22212 Caenorhabditis remanei CRE22212 I 0.890
CJA06107 Caenorhabditis japonica CJA06107 I 0.889
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.889
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.885
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.884
CBG04240 Caenorhabditis briggsae CBG04240 I 0.871
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.865
CRE24933 Caenorhabditis remanei CRE24933 I 0.861
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.860
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.860
BXY_0412900 Bursaphelenchus xylophilus BXY_0412900 I 0.852
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.845
SMUV_0001036101 Syphacia muris SMUV_0001036101 I 0.831
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.824
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.824
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.824
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.824
Bm5457 Brugia malayi Bm5457 I 0.821
CBG22776 Caenorhabditis briggsae CBG22776 I 0.821
CBN08474 Caenorhabditis brenneri CBN08474 I 0.821
CJA14035 Caenorhabditis japonica CJA14035 I 0.821
CRE21925 Caenorhabditis remanei CRE21925 I 0.821
LOAG_07549 Loa loa LOAG_07549 I 0.821
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.821
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.821
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.821
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.821
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.821
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.821
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.821
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.821
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.821
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.821
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.821
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.821
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.821
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.819
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.819
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.817
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.817
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.817
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.816
L889_g25097 Steinernema feltiae L889_g25097 I 0.816
L892_g186 Steinernema scapterisci L892_g186 I 0.816
L898_g18440 Steinernema monticolum L898_g18440 I 0.816
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.813
PPA14696 Pristionchus pacificus PPA14696 I 0.811
Minc11307 Meloidogyne incognita Minc11307 I 0.803
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.803
L893_g6023 Steinernema glaseri L893_g6023 I 0.801
SSTP_0001170700 Strongyloides stercoralis SSTP_0001170700 I 0.800
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.799
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.795
MhA1_Contig1031.frz3.gene17 Meloidogyne hapla MhA1_Contig1031.frz3.gene17 N 0.792
tetur01g11040 Tetranychus urticae tetur01g11040 I 0.780
L798_02234 Zootermopsis nevadensis L798_02234 I 0.775
HelroG139475 Helobdella robusta HelroG139475 I 0.773
Hr51 Drosophila melanogaster FBgn0034012 D 0.772
GF13031 Drosophila ananassae FBgn0090064 I 0.772
GH20426 Drosophila grimshawi FBgn0127889 I 0.772
GI19610 Drosophila mojavensis FBgn0142347 I 0.772
GL17752 Drosophila persimilis FBgn0155355 I 0.772
GD11109 Drosophila simulans FBgn0182865 I 0.772
GJ14974 Drosophila virilis FBgn0202177 I 0.772
GK20892 Drosophila willistoni FBgn0222886 I 0.772
GE13645 Drosophila yakuba FBgn0231304 I 0.772
GA30480 Drosophila pseudoobscura FBgn0264774 D 0.772
GB49738 Apis mellifera GB49738 I 0.772
NV14480 Nasonia vitripennis NV14480 I 0.772
PHUM039420 Pediculus humanus PHUM039420 I 0.772
RPRC002557 Rhodnius prolixus RPRC002557 I 0.772
TC009378 Tribolium castaneum TC009378 I 0.772
Hsal_07902--XP_396999.3_APIME Harpegnathos saltator Hsal_07902--XP_396999.3_APIME I 0.772
LDEC022044 Leptinotarsa decemlineata LDEC022044 I 0.772
MDOA010244 Musca domestica MDOA010244 I 0.772
AAEL007190 Aedes aegypti AAEL007190 I 0.770
ACYPI007601 Acyrthosiphon pisum ACYPI007601 I 0.770
ADAC006988 Anopheles darlingi ADAC006988 I 0.770
AALB001133 Anopheles albimanus AALB001133 I 0.770
AARA003887 Anopheles arabiensis AARA003887 I 0.770
AATE003142 Anopheles atroparvus AATE003142 I 0.770
ACOM026748 Anopheles coluzzii ACOM026748 I 0.770
AEPI011067 Anopheles epiroticus AEPI011067 I 0.770
AFAF011447 Anopheles farauti AFAF011447 I 0.770
AMEM000983 Anopheles merus AMEM000983 I 0.770
CGI_10007932 Crassostrea gigas CGI_10007932 I 0.769
NR2E3 Anolis carolinensis ENSACAG00000011910 I 0.769
NR2E3 Gasterosteus aculeatus ENSGACG00000017060 I 0.769
ENSGMOG00000019194 Gadus morhua ENSGMOG00000019194 I 0.769
ENSLACG00000022378 Latimeria chalumnae ENSLACG00000022378 I 0.769
ENSLOCG00000014973 Lepisosteus oculatus ENSLOCG00000014973 I 0.769
ENSONIG00000007109 Oreochromis niloticus ENSONIG00000007109 I 0.769
NR2E3 Oryzias latipes ENSORLG00000000011 I 0.769
ENSPFOG00000006106 Poecilia formosa ENSPFOG00000006106 I 0.769
NR2E3 Takifugu rubripes ENSTRUG00000015582 I 0.769
ENSXMAG00000010311 Xiphophorus maculatus ENSXMAG00000010311 I 0.769
LotgiG137595 Lottia gigantea LotgiG137595 I 0.769
Alligator_sinensis_CCG020979.1 Alligator sinensis Alligator_sinensis_CCG020979.1 I 0.769
Cmyd_10012017 Chelonia mydas Cmyd_10012017 I 0.769
Ogr12843 Ophisaurus gracilis Ogr12843 I 0.769
Pvit_13689 Pogona vitticeps Pvit_13689 I 0.769
ENSAMXG00000017872 Astyanax mexicanus ENSAMXG00000017872 I 0.765
nr2e3 Danio rerio ENSDARG00000045904 I 0.765
e_gw.107.44.1 Branchiostoma floridae e_gw.107.44.1 I 0.765
e_gw.324.28.1 Branchiostoma floridae e_gw.324.28.1 I 0.765
PTRK_0000861400 Parastrongyloides trichosuri PTRK_0000861400 I 0.759
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.752
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.752
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.752
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.752
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.752
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.750
L892_g2422 Steinernema scapterisci L892_g2422 I 0.750
CapteG171557 Capitella teleta CapteG171557 I 0.747
ENSFALG00000009699 Ficedula albicollis ENSFALG00000009699 I 0.747
NR2E3 Gallus gallus ENSGALG00000002093 I 0.747
ENSTGUG00000004498 Taeniopygia guttata ENSTGUG00000004498 I 0.747
Aan_R004022 Calypte anna Aan_R004022 I 0.747
Afo_R007066 Aptenodytes forsteri Afo_R007066 I 0.747
Gfo_R008863 Geospiza fortis Gfo_R008863 I 0.747
BGLB004019 Biomphalaria glabrata BGLB004019 I 0.747