HPBE_0001033901 (Heligmosomoides bakeri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HPBE_0001033901 T308863_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.863 0.586
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.765 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0001033901-mRNA-1 Nuclear receptor 17 86

Links

Other Nuclear receptor family TFs
Other Heligmosomoides bakeri TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.992
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.992
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.992
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.991
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.990
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.990
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.990
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.990
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.989
L889_g25097 Steinernema feltiae L889_g25097 I 0.989
L892_g186 Steinernema scapterisci L892_g186 I 0.989
L898_g18440 Steinernema monticolum L898_g18440 I 0.989
Bm5457 Brugia malayi Bm5457 I 0.988
CBG22776 Caenorhabditis briggsae CBG22776 I 0.988
CBN08474 Caenorhabditis brenneri CBN08474 I 0.988
CJA14035 Caenorhabditis japonica CJA14035 I 0.988
CRE21925 Caenorhabditis remanei CRE21925 I 0.988
LOAG_07549 Loa loa LOAG_07549 I 0.988
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.988
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.988
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.988
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.988
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.988
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.988
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.988
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.988
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.988
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.988
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.988
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.988
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.987
L893_g6023 Steinernema glaseri L893_g6023 I 0.987
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.987
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.987
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.984
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.970
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.956
Minc11307 Meloidogyne incognita Minc11307 I 0.955
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.955
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.910
L892_g3438 Steinernema scapterisci L892_g3438 I 0.910
L898_g9613 Steinernema monticolum L898_g9613 I 0.900
L889_g15424 Steinernema feltiae L889_g15424 I 0.898
L893_g33656 Steinernema glaseri L893_g33656 I 0.898
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.885
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.870
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.865
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.865
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.864
CBG03844 Caenorhabditis briggsae CBG03844 I 0.863
CBN18198 Caenorhabditis brenneri CBN18198 I 0.863
CBN20749 Caenorhabditis brenneri CBN20749 I 0.863
CRE08259 Caenorhabditis remanei CRE08259 I 0.863
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.863
ASU_03870 Ascaris suum ASU_03870 I 0.863
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.863
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.863
LOAG_08615 Loa loa LOAG_08615 I 0.862
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.862
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.862
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.862
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.862
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.860
CBG03860 Caenorhabditis briggsae CBG03860 I 0.859
CBN05776 Caenorhabditis brenneri CBN05776 I 0.859
CJA19445 Caenorhabditis japonica CJA19445 I 0.859
CRE08264 Caenorhabditis remanei CRE08264 I 0.859
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.859
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.859
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.859
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.859
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.859
L889_g17247 Steinernema feltiae L889_g17247 I 0.859
L898_g26357 Steinernema monticolum L898_g26357 I 0.859
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.857
CJA02727 Caenorhabditis japonica CJA02727 I 0.856
CBG13142 Caenorhabditis briggsae CBG13142 I 0.848
CBN04415 Caenorhabditis brenneri CBN04415 I 0.848
CBN32300 Caenorhabditis brenneri CBN32300 I 0.848
CRE26423 Caenorhabditis remanei CRE26423 I 0.848
Bm4980 Brugia malayi Bm4980 I 0.846
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.846
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.845
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.845
L893_g13285 Steinernema glaseri L893_g13285 I 0.834
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.833
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.821
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.820
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.817
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.817
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.817
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.817
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.811
CBG03466 Caenorhabditis briggsae CBG03466 I 0.809
CBN28641 Caenorhabditis brenneri CBN28641 I 0.809
CJA14611 Caenorhabditis japonica CJA14611 I 0.809
CRE29874 Caenorhabditis remanei CRE29874 I 0.809
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.809
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.809
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.809
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.809
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.809
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.809
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.809
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.809
L892_g17832 Steinernema scapterisci L892_g17832 I 0.809
CJA06107 Caenorhabditis japonica CJA06107 I 0.801
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.801
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.801
CRE24933 Caenorhabditis remanei CRE24933 I 0.797
SMAR014405 Strigamia maritima SMAR014405 I 0.794
CBG04240 Caenorhabditis briggsae CBG04240 I 0.792
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.792
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.790
L889_g16305 Steinernema feltiae L889_g16305 I 0.790
L893_g6565 Steinernema glaseri L893_g6565 I 0.790
L898_g5338 Steinernema monticolum L898_g5338 I 0.790
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.789
L892_g17146 Steinernema scapterisci L892_g17146 I 0.789
ENSAMXG00000013618 Astyanax mexicanus ENSAMXG00000013618 I 0.784
hnf4g Danio rerio ENSDARG00000071565 I 0.784
hnf4g Gasterosteus aculeatus ENSGACG00000002422 I 0.784
ENSONIG00000014490 Oreochromis niloticus ENSONIG00000014490 I 0.784
hnf4g Oryzias latipes ENSORLG00000006996 I 0.784
ENSPFOG00000009018 Poecilia formosa ENSPFOG00000009018 I 0.784
hnf4g Tetraodon nigroviridis ENSTNIG00000008126 I 0.784
ENSXMAG00000000648 Xiphophorus maculatus ENSXMAG00000000648 I 0.784
L889_g366 Steinernema feltiae L889_g366 I 0.781
L893_g5404 Steinernema glaseri L893_g5404 I 0.781
hnf4g Takifugu rubripes ENSTRUG00000000198 I 0.780
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.780
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.777
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.777
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.777
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.775
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.774
NECAME_02375 Necator americanus NECAME_02375 I 0.774
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.772
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.772
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.772
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.772
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.772
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.772
CBG22587 Caenorhabditis briggsae CBG22587 I 0.769
CRE07033 Caenorhabditis remanei CRE07033 I 0.769
CRE10779 Caenorhabditis remanei CRE10779 I 0.769
tetur05g04280 Tetranychus urticae tetur05g04280 I 0.766
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.766
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.765
HCOI00592600 Haemonchus contortus HCOI00592600 I 0.765
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I 0.763
CBN00088 Caenorhabditis brenneri CBN00088 I 0.760
CBN21958 Caenorhabditis brenneri CBN21958 I 0.760
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.755
ECANG7_07248 Echinococcus canadensis ECANG7_07248 I 0.754
EmuJ_000088800 Echinococcus multilocularis EmuJ_000088800 I 0.754
HmN_000254900 Hymenolepis microstoma HmN_000254900 I 0.754
TsM_000004500 Taenia solium TsM_000004500 I 0.754
TTAC_0000076101 Hydatigera taeniaeformis TTAC_0000076101 I 0.753
BGLB013485 Biomphalaria glabrata BGLB013485 I 0.752
ASU_00971 Ascaris suum ASU_00971 I 0.752
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.752
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.752
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.752
CBG14996 Caenorhabditis briggsae CBG14996 I 0.750
CBN11572 Caenorhabditis brenneri CBN11572 I 0.750
CJA14248 Caenorhabditis japonica CJA14248 I 0.750
HelroG67417 Helobdella robusta HelroG67417 I 0.750
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.750
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.750
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.750
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.750
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.750
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.750
ENSGMOG00000001972 Gadus morhua ENSGMOG00000001972 I 0.747
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.747
ENSPFOG00000001827 Poecilia formosa ENSPFOG00000001827 I 0.745
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.745
L889_g31970 Steinernema feltiae L889_g31970 I 0.745
L893_g263 Steinernema glaseri L893_g263 I 0.745
L898_g11608 Steinernema monticolum L898_g11608 I 0.745