CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc11307
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc11307
T307399_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.868
0.557
nhr-34
M00690_2.00
Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN
PBM
Narasimhan et al.(2015)
pTH9907
0.798
0.514
nhr-154
M00698_2.00
Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN
PBM
Narasimhan et al.(2015)
pTH10650
0.762
0.486
CBG23380
M01296_2.00
Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN
PBM
Lambert et al.(2019)
pTH11449
0.760
0.486
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc11307
Nuclear receptor
67
136
DFCVVCNDKAIGKHYGAVSCNGCKGFFRRTVWQNLQYSCRFSNNCKVDKTRRNACRACRFKKCLIEGMRI
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
221 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MhA1_Contig691.frz3.gene13
Meloidogyne hapla
MhA1_Contig691.frz3.gene13
I
0.994
GPLIN_000327200
Globodera pallida
GPLIN_000327200
I
0.980
BXY_0861500
Bursaphelenchus xylophilus
BXY_0861500
I
0.972
Ppa-nhr-14
Pristionchus pacificus
PPA06980
I
0.969
L893_g6023
Steinernema glaseri
L893_g6023
I
0.969
scaffold1338-EXSNAP2012.3
Pristionchus exspectatus
scaffold1338-EXSNAP2012.3
I
0.969
L596_g9277
Steinernema carpocapsae
L596_g9277
I
0.968
L889_g25097
Steinernema feltiae
L889_g25097
I
0.968
L892_g186
Steinernema scapterisci
L892_g186
I
0.968
L898_g18440
Steinernema monticolum
L898_g18440
I
0.968
PTRK_0001591500
Parastrongyloides trichosuri
PTRK_0001591500
I
0.967
SPAL_0001056000
Strongyloides papillosus
SPAL_0001056000
I
0.967
SSTP_0000230100
Strongyloides stercoralis
SSTP_0000230100
I
0.967
SVE_1768400
Strongyloides venezuelensis
SVE_1768400
I
0.967
Bm5457
Brugia malayi
Bm5457
I
0.965
CBG22776
Caenorhabditis briggsae
CBG22776
I
0.965
CBN08474
Caenorhabditis brenneri
CBN08474
I
0.965
CJA14035
Caenorhabditis japonica
CJA14035
I
0.965
CRE21925
Caenorhabditis remanei
CRE21925
I
0.965
LOAG_07549
Loa loa
LOAG_07549
I
0.965
nhr-14
Caenorhabditis elegans
WBGene00003613
I
0.965
WBGene00239376
Onchocerca volvulus
WBGene00239376
I
0.965
ASIM_0001548701
Anisakis simplex
ASIM_0001548701
I
0.965
BTMF_0001565301
Brugia timori
BTMF_0001565301
I
0.965
EEL_0000265301
Elaeophora elaphi
EEL_0000265301
I
0.965
nAv.1.0.1.g08447
Acanthocheilonema viteae
nAv.1.0.1.g08447
I
0.965
nDi.2.2.2.g03974
Dirofilaria immitis
nDi.2.2.2.g03974
I
0.965
nLs.2.1.2.g04526
Litomosoides sigmodontis
nLs.2.1.2.g04526
I
0.965
nOo.2.0.1.g02628
Onchocerca ochengi
nOo.2.0.1.g02628
I
0.965
OFLC_0000076301
Onchocerca flexuosa
OFLC_0000076301
I
0.965
SMUV_0000835401
Syphacia muris
SMUV_0000835401
I
0.965
TCLT_0000342401
Thelazia callipaeda
TCLT_0000342401
I
0.965
TCNE_0000582701
Toxocara canis
TCNE_0000582701
I
0.965
RSKR_0001175400
Rhabditophanes kr3021
RSKR_0001175400
I
0.963
HPBE_0001033901
Heligmosomoides bakeri
HPBE_0001033901
I
0.955
ANCCAN_20599
Ancylostoma caninum
ANCCAN_20599
I
0.954
CGOC_0000279901
Cylicostephanus goldi
CGOC_0000279901
I
0.954
HPLM_0000308401
Haemonchus placei
HPLM_0000308401
I
0.954
OESDEN_00859
Oesophagostomum dentatum
OESDEN_00859
I
0.954
L892_g3438
Steinernema scapterisci
L892_g3438
I
0.921
L596_g7829
Steinernema carpocapsae
L596_g7829
I
0.917
L898_g9613
Steinernema monticolum
L898_g9613
I
0.912
L889_g15424
Steinernema feltiae
L889_g15424
I
0.910
L893_g33656
Steinernema glaseri
L893_g33656
I
0.910
scaffold488-EXSNAP2012.17
Pristionchus exspectatus
scaffold488-EXSNAP2012.17
I
0.894
ACAC_0000711701
Angiostrongylus cantonensis
ACAC_0000711701
I
0.886
DICVIV_00957
Dictyocaulus viviparus
DICVIV_00957
I
0.886
HCOI00618700
Haemonchus contortus
HCOI00618700
I
0.886
SPAL_0001099500
Strongyloides papillosus
SPAL_0001099500
I
0.885
SSTP_0000769100
Strongyloides stercoralis
SSTP_0000769100
I
0.885
SVE_0858700
Strongyloides venezuelensis
SVE_0858700
I
0.885
PTRK_0001020800
Parastrongyloides trichosuri
PTRK_0001020800
I
0.883
PTRK_0000720500
Parastrongyloides trichosuri
PTRK_0000720500
I
0.882
SSTP_0000145700
Strongyloides stercoralis
SSTP_0000145700
I
0.882
SPAL_0000841700
Strongyloides papillosus
SPAL_0000841700
I
0.880
SVE_1799100
Strongyloides venezuelensis
SVE_1799100
I
0.880
nhr-118
Caenorhabditis elegans
WBGene00003708
I
0.878
CBG03860
Caenorhabditis briggsae
CBG03860
I
0.873
CBN05776
Caenorhabditis brenneri
CBN05776
I
0.873
CJA19445
Caenorhabditis japonica
CJA19445
I
0.873
CRE08264
Caenorhabditis remanei
CRE08264
I
0.873
nhr-62
Caenorhabditis elegans
WBGene00003652
I
0.873
Hba_17038
Heterorhabditis bacteriophora
Hba_17038
I
0.873
HCOI01945300
Haemonchus contortus
HCOI01945300
I
0.873
HCOI02126500
Haemonchus contortus
HCOI02126500
I
0.873
HPLM_0001358001
Haemonchus placei
HPLM_0001358001
I
0.873
CBG03844
Caenorhabditis briggsae
CBG03844
I
0.868
CBN18198
Caenorhabditis brenneri
CBN18198
I
0.868
CBN20749
Caenorhabditis brenneri
CBN20749
I
0.868
CRE08259
Caenorhabditis remanei
CRE08259
I
0.868
nhr-49
Caenorhabditis elegans
WBGene00003639
D
0.868
ASU_03870
Ascaris suum
ASU_03870
I
0.868
BXY_1057600
Bursaphelenchus xylophilus
BXY_1057600
I
0.868
GPLIN_001175700
Globodera pallida
GPLIN_001175700
I
0.868
PEQ_0000391501
Parascaris equorum
PEQ_0000391501
I
0.868
TCLT_0000461101
Thelazia callipaeda
TCLT_0000461101
I
0.868
LOAG_08615
Loa loa
LOAG_08615
I
0.867
WBGene00236987
Onchocerca volvulus
WBGene00236987
I
0.867
nOo.2.0.1.g02345
Onchocerca ochengi
nOo.2.0.1.g02345
I
0.867
BXY_1082600
Bursaphelenchus xylophilus
BXY_1082600
I
0.865
HPBE_0001438801
Heligmosomoides bakeri
HPBE_0001438801
I
0.860
CJA02727
Caenorhabditis japonica
CJA02727
I
0.859
DME_0000747901
Dracunculus medinensis
DME_0000747901
I
0.855
Bm4980
Brugia malayi
Bm4980
I
0.853
nhr-21
Caenorhabditis elegans
WBGene00003620
I
0.853
BTMF_0000217201
Brugia timori
BTMF_0000217201
I
0.853
DME_0000591901
Dracunculus medinensis
DME_0000591901
I
0.853
CBG13142
Caenorhabditis briggsae
CBG13142
I
0.852
CBN04415
Caenorhabditis brenneri
CBN04415
I
0.852
CBN32300
Caenorhabditis brenneri
CBN32300
I
0.852
CRE26423
Caenorhabditis remanei
CRE26423
I
0.852
L893_g13285
Steinernema glaseri
L893_g13285
I
0.841
L596_g11035
Steinernema carpocapsae
L596_g11035
I
0.840
L889_g17247
Steinernema feltiae
L889_g17247
I
0.840
L898_g26357
Steinernema monticolum
L898_g26357
I
0.840
RSKR_0001067400
Rhabditophanes kr3021
RSKR_0001067400
I
0.838
L596_g9904
Steinernema carpocapsae
L596_g9904
I
0.834
L892_g17832
Steinernema scapterisci
L892_g17832
I
0.834
PPA06637
Pristionchus pacificus
PPA06637
I
0.832
PTRK_0001236400
Parastrongyloides trichosuri
PTRK_0001236400
I
0.832
TCLT_0000612301
Thelazia callipaeda
TCLT_0000612301
I
0.832
scaffold598-EXSNAP2012.5
Pristionchus exspectatus
scaffold598-EXSNAP2012.5
I
0.830
scaffold605-EXSNAP2012.9
Pristionchus exspectatus
scaffold605-EXSNAP2012.9
I
0.827
ASU_13587
Ascaris suum
ASU_13587
I
0.825
scaffold251-EXSNAP2012.44
Pristionchus exspectatus
scaffold251-EXSNAP2012.44
I
0.825
scaffold826-EXSNAP2012.10
Pristionchus exspectatus
scaffold826-EXSNAP2012.10
I
0.825
EEL_0000204901
Elaeophora elaphi
EEL_0000204901
I
0.821
nAv.1.0.1.g09196
Acanthocheilonema viteae
nAv.1.0.1.g09196
I
0.821
Ppa-nhr-61
Pristionchus pacificus
PPA27722
I
0.815
L889_g1557
Steinernema feltiae
L889_g1557
I
0.814
SPAL_0001637600
Strongyloides papillosus
SPAL_0001637600
I
0.813
SSTP_0000055100
Strongyloides stercoralis
SSTP_0000055100
I
0.813
SVE_0429000
Strongyloides venezuelensis
SVE_0429000
I
0.813
L898_g9866
Steinernema monticolum
L898_g9866
I
0.812
PTRK_0000994100
Parastrongyloides trichosuri
PTRK_0000994100
I
0.812
LOAG_08636
Loa loa
LOAG_08636
I
0.810
WBGene00240560
Onchocerca volvulus
WBGene00240560
I
0.810
nDi.2.2.2.g09348
Dirofilaria immitis
nDi.2.2.2.g09348
I
0.810
nOo.2.0.1.g03859
Onchocerca ochengi
nOo.2.0.1.g03859
I
0.810
L596_g26401
Steinernema carpocapsae
L596_g26401
I
0.808
L889_g16305
Steinernema feltiae
L889_g16305
I
0.808
L889_g366
Steinernema feltiae
L889_g366
I
0.808
L892_g17146
Steinernema scapterisci
L892_g17146
I
0.808
L893_g5404
Steinernema glaseri
L893_g5404
I
0.808
L893_g6565
Steinernema glaseri
L893_g6565
I
0.808
L898_g5338
Steinernema monticolum
L898_g5338
I
0.808
NBR_0000015501
Nippostrongylus brasiliensis
NBR_0000015501
I
0.807
NECAME_02375
Necator americanus
NECAME_02375
I
0.805
CBG03466
Caenorhabditis briggsae
CBG03466
I
0.804
CBN28641
Caenorhabditis brenneri
CBN28641
I
0.804
CJA14611
Caenorhabditis japonica
CJA14611
I
0.804
CRE29874
Caenorhabditis remanei
CRE29874
I
0.804
nhr-4
Caenorhabditis elegans
WBGene00003603
I
0.804
ACAC_0000956101
Angiostrongylus cantonensis
ACAC_0000956101
I
0.804
ACOC_0000749401
Angiostrongylus costaricensis
ACOC_0000749401
I
0.804
BXY_0053200
Bursaphelenchus xylophilus
BXY_0053200
I
0.804
BXY_1375200
Bursaphelenchus xylophilus
BXY_1375200
I
0.804
DICVIV_01644
Dictyocaulus viviparus
DICVIV_01644
I
0.804
HCOI00094500
Haemonchus contortus
HCOI00094500
I
0.804
HCOI01442000
Haemonchus contortus
HCOI01442000
I
0.804
HPBE_0001524301
Heligmosomoides bakeri
HPBE_0001524301
I
0.804
ASU_00971
Ascaris suum
ASU_00971
I
0.803
EVEC_0000864401
Enterobius vermicularis
EVEC_0000864401
I
0.803
nLs.2.1.2.g04051
Litomosoides sigmodontis
nLs.2.1.2.g04051
I
0.803
SMUV_0000230901
Syphacia muris
SMUV_0000230901
I
0.803
L893_g28857
Steinernema glaseri
L893_g28857
I
0.802
DICVIV_11073
Dictyocaulus viviparus
DICVIV_11073
I
0.799
nhr-34
Caenorhabditis elegans
WBGene00003627
D
0.798
BXY_1057700
Bursaphelenchus xylophilus
BXY_1057700
I
0.796
HCOI01927800
Haemonchus contortus
HCOI01927800
I
0.796
TELCIR_07460
Teladorsagia circumcincta
TELCIR_07460
I
0.796
Minc13747
Meloidogyne incognita
Minc13747
I
0.795
Minc17538
Meloidogyne incognita
Minc17538
I
0.795
MhA1_Contig817.frz3.gene1
Meloidogyne hapla
MhA1_Contig817.frz3.gene1
I
0.795
ANCCAN_08267
Ancylostoma caninum
ANCCAN_08267
I
0.794
ANCCAN_22066
Ancylostoma caninum
ANCCAN_22066
I
0.794
ANCCEY_12461
Ancylostoma ceylanicum
ANCCEY_12461
I
0.794
ANCDUO_15746
Ancylostoma duodenale
ANCDUO_15746
I
0.794
NBR_0001473401
Nippostrongylus brasiliensis
NBR_0001473401
I
0.794
SVUK_0000195901
Strongylus vulgaris
SVUK_0000195901
I
0.794
CBG22587
Caenorhabditis briggsae
CBG22587
I
0.793
CRE07033
Caenorhabditis remanei
CRE07033
I
0.793
CRE10779
Caenorhabditis remanei
CRE10779
I
0.793
MhA1_Contig70.frz3.gene31
Meloidogyne hapla
MhA1_Contig70.frz3.gene31
I
0.793
PTRK_0000748600
Parastrongyloides trichosuri
PTRK_0000748600
I
0.793
RSKR_0000178700
Rhabditophanes kr3021
RSKR_0000178700
I
0.793
L596_g23123
Steinernema carpocapsae
L596_g23123
I
0.792
GPLIN_000284100
Globodera pallida
GPLIN_000284100
I
0.790
NECAME_11999
Necator americanus
NECAME_11999
I
0.790
L892_g4134
Steinernema scapterisci
L892_g4134
I
0.789
PTRK_0000480700
Parastrongyloides trichosuri
PTRK_0000480700
I
0.789
SPAL_0001712900
Strongyloides papillosus
SPAL_0001712900
I
0.789
SSTP_0001253400
Strongyloides stercoralis
SSTP_0001253400
I
0.789
SVE_0146100
Strongyloides venezuelensis
SVE_0146100
I
0.789
L889_g11570
Steinernema feltiae
L889_g11570
I
0.787
L893_g21283
Steinernema glaseri
L893_g21283
I
0.787
L898_g23058
Steinernema monticolum
L898_g23058
I
0.787
CBG14996
Caenorhabditis briggsae
CBG14996
I
0.781
L596_g25910
Steinernema carpocapsae
L596_g25910
I
0.780
L889_g31970
Steinernema feltiae
L889_g31970
I
0.780
L893_g263
Steinernema glaseri
L893_g263
I
0.780
L898_g11608
Steinernema monticolum
L898_g11608
I
0.780
scaffold52-EXSNAP2012.30
Pristionchus exspectatus
scaffold52-EXSNAP2012.30
I
0.780
scaffold277-EXSNAP2012.12
Pristionchus exspectatus
scaffold277-EXSNAP2012.12
I
0.779
HCOI00891400
Haemonchus contortus
HCOI00891400
I
0.778
CJA14248
Caenorhabditis japonica
CJA14248
I
0.775
SPAL_0000533900
Strongyloides papillosus
SPAL_0000533900
I
0.775
SSTP_0000860300
Strongyloides stercoralis
SSTP_0000860300
I
0.775
SVE_0105800
Strongyloides venezuelensis
SVE_0105800
I
0.775
CBN18824
Caenorhabditis brenneri
CBN18824
I
0.774
CBN19472
Caenorhabditis brenneri
CBN19472
I
0.774
scaffold43-EXSNAP2012.41
Pristionchus exspectatus
scaffold43-EXSNAP2012.41
I
0.773
CJA06107
Caenorhabditis japonica
CJA06107
I
0.772
CRE07035
Caenorhabditis remanei
CRE07035
I
0.772
nhr-61
Caenorhabditis elegans
WBGene00003651
I
0.772
CBG04240
Caenorhabditis briggsae
CBG04240
I
0.766
PTRK_0000862000
Parastrongyloides trichosuri
PTRK_0000862000
I
0.766
SSTP_0001140400
Strongyloides stercoralis
SSTP_0001140400
I
0.766
CRE30089
Caenorhabditis remanei
CRE30089
I
0.764
CRE24933
Caenorhabditis remanei
CRE24933
I
0.763
nhr-154
Caenorhabditis elegans
WBGene00007547
D
0.762
CBG23380
Caenorhabditis briggsae
CBG23380
D
0.760
CBN28497
Caenorhabditis brenneri
CBN28497
I
0.760
CRE27050
Caenorhabditis remanei
CRE27050
I
0.760
CBG04204
Caenorhabditis briggsae
CBG04204
I
0.759
BXY_0631600
Bursaphelenchus xylophilus
BXY_0631600
I
0.759
MhA1_Contig2491.frz3.gene4
Meloidogyne hapla
MhA1_Contig2491.frz3.gene4
I
0.757
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0
I
0.755
NECAME_08394
Necator americanus
NECAME_08394
I
0.754
PPA21777
Pristionchus pacificus
PPA21777
I
0.751
HPLM_0000769401
Haemonchus placei
HPLM_0000769401
I
0.751
CRE09416
Caenorhabditis remanei
CRE09416
I
0.749
PPA22443
Pristionchus pacificus
PPA22443
I
0.749
scaffold107-EXSNAP2012.33
Pristionchus exspectatus
scaffold107-EXSNAP2012.33
I
0.749
CBN28791
Caenorhabditis brenneri
CBN28791
I
0.748
nhr-153
Caenorhabditis elegans
WBGene00007546
I
0.748
SPAL_0001213800
Strongyloides papillosus
SPAL_0001213800
I
0.748
SVE_0639400
Strongyloides venezuelensis
SVE_0639400
I
0.748
Hba_17946
Heterorhabditis bacteriophora
Hba_17946
I
0.747
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.746
CBG23381
Caenorhabditis briggsae
CBG23381
I
0.745