HPLM_0000769401 (Haemonchus placei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HPLM_0000769401 T308895_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.936 0.586
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.894 0.614
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.884 0.614
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.881 0.600
nhr-204
M00704_2.00 		Caenorhabditis elegans
NDNTGRTMHN
NDKAYCANHN		 PBM
Narasimhan et al.(2015)
pTH10028 		0.856 0.529
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.800 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPLM_0000769401-mRNA-1 Nuclear receptor 24 93

Links

Other Nuclear receptor family TFs
Other Haemonchus placei TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.994
NECAME_08394 Necator americanus NECAME_08394 I 0.992
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.991
L889_g1557 Steinernema feltiae L889_g1557 I 0.988
PPA21777 Pristionchus pacificus PPA21777 I 0.987
L893_g28857 Steinernema glaseri L893_g28857 I 0.987
L898_g9866 Steinernema monticolum L898_g9866 I 0.987
CBG10855 Caenorhabditis briggsae CBG10855 I 0.986
CBN24827 Caenorhabditis brenneri CBN24827 I 0.986
CJA08896 Caenorhabditis japonica CJA08896 I 0.986
CRE00149 Caenorhabditis remanei CRE00149 I 0.986
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.986
L892_g17612 Steinernema scapterisci L892_g17612 I 0.986
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.985
L893_g3565 Steinernema glaseri L893_g3565 I 0.985
ASU_03657 Ascaris suum ASU_03657 I 0.984
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.984
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.983
L892_g4169 Steinernema scapterisci L892_g4169 I 0.983
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.979
L889_g1891 Steinernema feltiae L889_g1891 I 0.979
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.973
CJA00680 Caenorhabditis japonica CJA00680 I 0.971
LOAG_16377 Loa loa LOAG_16377 I 0.969
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.969
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.968
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.965
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.963
CBG10857 Caenorhabditis briggsae CBG10857 I 0.961
CRE00606 Caenorhabditis remanei CRE00606 I 0.961
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.961
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.957
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.957
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.957
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.956
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.955
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.955
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.955
PPA29597 Pristionchus pacificus PPA29597 I 0.950
PPA24481 Pristionchus pacificus PPA24481 I 0.944
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.944
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.943
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.943
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.943
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.943
Bm4980 Brugia malayi Bm4980 I 0.942
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.942
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.942
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.940
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.940
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.940
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.940
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.939
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.939
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.939
NECAME_01944 Necator americanus NECAME_01944 I 0.939
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.939
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.939
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.938
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.938
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.938
PPA06637 Pristionchus pacificus PPA06637 I 0.937
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.937
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.937
CBG03844 Caenorhabditis briggsae CBG03844 I 0.936
CBN18198 Caenorhabditis brenneri CBN18198 I 0.936
CBN20749 Caenorhabditis brenneri CBN20749 I 0.936
CRE08259 Caenorhabditis remanei CRE08259 I 0.936
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.936
ASU_03870 Ascaris suum ASU_03870 I 0.936
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.936
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.936
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.936
LOAG_08615 Loa loa LOAG_08615 I 0.935
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.932
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.932
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.932
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.931
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.929
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.928
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.928
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.928
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.928
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.928
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.927
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.923
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.914
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.914
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.913
L889_g17247 Steinernema feltiae L889_g17247 I 0.913
L893_g13285 Steinernema glaseri L893_g13285 I 0.913
L898_g26357 Steinernema monticolum L898_g26357 I 0.913
Hba_12764 Heterorhabditis bacteriophora Hba_12764 N 0.900
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.898
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.895
CBG01866 Caenorhabditis briggsae CBG01866 I 0.894
CBN19235 Caenorhabditis brenneri CBN19235 I 0.894
CJA13458 Caenorhabditis japonica CJA13458 I 0.894
CRE03310 Caenorhabditis remanei CRE03310 I 0.894
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.894
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.894
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.894
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.894
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.894
ANCCEY_01235 Ancylostoma ceylanicum ANCCEY_01235 N 0.893
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.893
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.892
L889_g29879 Steinernema feltiae L889_g29879 I 0.892
L893_g3010 Steinernema glaseri L893_g3010 I 0.892
L898_g2764 Steinernema monticolum L898_g2764 I 0.892
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.891
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.891
Bm5319 Brugia malayi Bm5319 I 0.890
LOAG_00300 Loa loa LOAG_00300 I 0.890
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.890
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.890
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.890
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.890
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.890
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.890
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.889
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.887
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.884
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.882
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.882
CBG23380 Caenorhabditis briggsae CBG23380 D 0.881
CBN28497 Caenorhabditis brenneri CBN28497 I 0.881
CRE27050 Caenorhabditis remanei CRE27050 I 0.881
PPA10975 Pristionchus pacificus PPA10975 N 0.881
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.881
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.878
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.877
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.876
L898_g22454 Steinernema monticolum L898_g22454 I 0.874
TELCIR_12561 Teladorsagia circumcincta TELCIR_12561 N 0.873
PPA24468 Pristionchus pacificus PPA24468 I 0.869
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.869
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.864
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.864
CBG09380 Caenorhabditis briggsae CBG09380 I 0.863
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.863
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.862
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.862
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.862
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.862
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.862
L889_g7780 Steinernema feltiae L889_g7780 I 0.862
L892_g8671 Steinernema scapterisci L892_g8671 I 0.862
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.861
L893_g25227 Steinernema glaseri L893_g25227 I 0.861
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.860
ASU_12501 Ascaris suum ASU_12501 I 0.860
NECAME_00872 Necator americanus NECAME_00872 I 0.860
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.859
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.859
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.858
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.858
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.856
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.854
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.854
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.852
ANCCAN_20955 Ancylostoma caninum ANCCAN_20955 N 0.845
CRE25378 Caenorhabditis remanei CRE25378 I 0.840
CBG16594 Caenorhabditis briggsae CBG16594 I 0.838
CBN20518 Caenorhabditis brenneri CBN20518 I 0.838
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.838
ASU_10584 Ascaris suum ASU_10584 I 0.837
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.837
L889_g22901 Steinernema feltiae L889_g22901 I 0.837
L892_g5079 Steinernema scapterisci L892_g5079 I 0.837
L893_g15276 Steinernema glaseri L893_g15276 I 0.837
L898_g8573 Steinernema monticolum L898_g8573 I 0.837
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.833
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.832
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.828
ASU_13587 Ascaris suum ASU_13587 I 0.826
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.825
CBN29725 Caenorhabditis brenneri CBN29725 I 0.824
CRE27053 Caenorhabditis remanei CRE27053 I 0.824
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.823
CJA41479 Caenorhabditis japonica CJA41479 I 0.816
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.815
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.815
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.814
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.808
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.806
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.806
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.805
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.805
CRE30787 Caenorhabditis remanei CRE30787 I 0.804
CBN15481 Caenorhabditis brenneri CBN15481 I 0.803
CBN28528 Caenorhabditis brenneri CBN28528 I 0.803
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.803
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.803
CJA14829 Caenorhabditis japonica CJA14829 I 0.802
CBG23381 Caenorhabditis briggsae CBG23381 I 0.801
CBG26996 Caenorhabditis briggsae CBG26996 I 0.800
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.800
CBN23409 Caenorhabditis brenneri CBN23409 I 0.799
CBN28056 Caenorhabditis brenneri CBN28056 I 0.799
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.799
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.799
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.799
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.799
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.798
scaffold178-EXSNAP2012.20 Pristionchus exspectatus scaffold178-EXSNAP2012.20 N 0.796
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.793
CBN28791 Caenorhabditis brenneri CBN28791 I 0.787
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.787
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.787
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.787
CRE27052 Caenorhabditis remanei CRE27052 I 0.781
Minc13747 Meloidogyne incognita Minc13747 I 0.781
Minc17538 Meloidogyne incognita Minc17538 I 0.781
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.781
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.779
CRE26981 Caenorhabditis remanei CRE26981 I 0.777
LOAG_08636 Loa loa LOAG_08636 I 0.777
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.777
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.777
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.777
ASU_02757 Ascaris suum ASU_02757 N 0.772
scaffold204-EXSNAP2012.8 Pristionchus exspectatus scaffold204-EXSNAP2012.8 N 0.770
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.767
ALUE_0001217501 Ascaris lumbricoides ALUE_0001217501 N 0.764
PPA27013 Pristionchus pacificus PPA27013 N 0.761
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.761
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.761
L889_g11570 Steinernema feltiae L889_g11570 I 0.760
L893_g21283 Steinernema glaseri L893_g21283 I 0.760
L898_g23058 Steinernema monticolum L898_g23058 I 0.760
PPA20196 Pristionchus pacificus PPA20196 I 0.759
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.759
L892_g4134 Steinernema scapterisci L892_g4134 I 0.758
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.755
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.754
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.754
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.754
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.754
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.754
Minc11307 Meloidogyne incognita Minc11307 I 0.751