CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold204-EXSNAP2012.8
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold204-EXSNAP2012.8
T310226_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold204-EXSNAP2012.8
Nuclear receptor
66
125
EDCFVCGDAATGYHYDVASCNGCKTFFRRTILDQRTFVCKKNGDCFSVLPKAAHDRSQAA
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold426-EXSNAP2012.35
Pristionchus exspectatus
scaffold426-EXSNAP2012.35
I
0.855
PPA10975
Pristionchus pacificus
PPA10975
N
0.802
L893_g28857
Steinernema glaseri
L893_g28857
I
0.795
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.793
PPA24481
Pristionchus pacificus
PPA24481
I
0.790
scaffold552-EXSNAP2012.17
Pristionchus exspectatus
scaffold552-EXSNAP2012.17
I
0.790
L889_g1557
Steinernema feltiae
L889_g1557
I
0.785
L898_g9866
Steinernema monticolum
L898_g9866
I
0.785
scaffold43-EXSNAP2012.41
Pristionchus exspectatus
scaffold43-EXSNAP2012.41
I
0.781
CBN24827
Caenorhabditis brenneri
CBN24827
I
0.780
CBG10855
Caenorhabditis briggsae
CBG10855
I
0.779
CJA08896
Caenorhabditis japonica
CJA08896
I
0.779
CRE00149
Caenorhabditis remanei
CRE00149
I
0.779
nhr-120
Caenorhabditis elegans
WBGene00003710
I
0.779
PPA29597
Pristionchus pacificus
PPA29597
I
0.778
PPA21777
Pristionchus pacificus
PPA21777
I
0.771
HCOI01292200
Haemonchus contortus
HCOI01292200
I
0.770
HPLM_0000769401
Haemonchus placei
HPLM_0000769401
I
0.770
NECAME_08394
Necator americanus
NECAME_08394
I
0.770
L596_g27472
Steinernema carpocapsae
L596_g27472
I
0.748
TCLT_0000256201
Thelazia callipaeda
TCLT_0000256201
I
0.747
L893_g3565
Steinernema glaseri
L893_g3565
I
0.746