PPA21777 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA21777 T305914_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.944 0.619
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.889 0.603
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.856 0.683
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.856 0.667
nhr-204
M00704_2.00 		Caenorhabditis elegans
NDNTGRTMHN
NDKAYCANHN		 PBM
Narasimhan et al.(2015)
pTH10028 		0.848 0.524
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.826 0.508
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA21777 Nuclear receptor 60 122

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.991
NECAME_08394 Necator americanus NECAME_08394 I 0.989
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.988
L889_g1557 Steinernema feltiae L889_g1557 I 0.988
L893_g28857 Steinernema glaseri L893_g28857 I 0.988
L898_g9866 Steinernema monticolum L898_g9866 I 0.988
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.987
CRE00149 Caenorhabditis remanei CRE00149 I 0.986
CBG10855 Caenorhabditis briggsae CBG10855 I 0.985
CJA08896 Caenorhabditis japonica CJA08896 I 0.985
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.985
CBN24827 Caenorhabditis brenneri CBN24827 I 0.984
L892_g17612 Steinernema scapterisci L892_g17612 I 0.984
L893_g3565 Steinernema glaseri L893_g3565 I 0.984
L892_g4169 Steinernema scapterisci L892_g4169 I 0.983
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.979
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.976
L889_g1891 Steinernema feltiae L889_g1891 I 0.975
CJA00680 Caenorhabditis japonica CJA00680 I 0.973
ASU_03657 Ascaris suum ASU_03657 I 0.973
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.973
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.970
LOAG_16377 Loa loa LOAG_16377 I 0.964
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.964
CBG10857 Caenorhabditis briggsae CBG10857 I 0.963
CRE00606 Caenorhabditis remanei CRE00606 I 0.963
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.963
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.962
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.962
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.959
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.949
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.949
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.949
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.949
PPA24481 Pristionchus pacificus PPA24481 I 0.948
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.948
PPA29597 Pristionchus pacificus PPA29597 I 0.946
Bm4980 Brugia malayi Bm4980 I 0.944
CBG03844 Caenorhabditis briggsae CBG03844 I 0.944
CBN18198 Caenorhabditis brenneri CBN18198 I 0.944
CBN20749 Caenorhabditis brenneri CBN20749 I 0.944
CRE08259 Caenorhabditis remanei CRE08259 I 0.944
LOAG_08615 Loa loa LOAG_08615 I 0.944
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.944
ASU_03870 Ascaris suum ASU_03870 I 0.944
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.944
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.944
NECAME_01944 Necator americanus NECAME_01944 I 0.944
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.944
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.944
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.943
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.943
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.943
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.943
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.942
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.942
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.942
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.942
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.941
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.941
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.941
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.940
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.940
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.940
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.940
PPA06637 Pristionchus pacificus PPA06637 I 0.939
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.939
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.937
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.937
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.937
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.937
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.937
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.937
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.937
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.937
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.937
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.937
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.936
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.936
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.936
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.936
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.934
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.934
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.934
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.932
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.924
L889_g17247 Steinernema feltiae L889_g17247 I 0.924
L893_g13285 Steinernema glaseri L893_g13285 I 0.924
L898_g26357 Steinernema monticolum L898_g26357 I 0.924
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.924
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.923
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.922
PPA10975 Pristionchus pacificus PPA10975 N 0.898
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.898
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.897
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.896
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.895
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.893
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.891
L889_g29879 Steinernema feltiae L889_g29879 I 0.891
L893_g3010 Steinernema glaseri L893_g3010 I 0.891
L898_g2764 Steinernema monticolum L898_g2764 I 0.891
CBG01866 Caenorhabditis briggsae CBG01866 I 0.889
CBN19235 Caenorhabditis brenneri CBN19235 I 0.889
CJA13458 Caenorhabditis japonica CJA13458 I 0.889
CRE03310 Caenorhabditis remanei CRE03310 I 0.889
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.889
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.889
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.889
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.889
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.889
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.889
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.889
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.886
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.886
Bm5319 Brugia malayi Bm5319 I 0.885
LOAG_00300 Loa loa LOAG_00300 I 0.885
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.885
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.885
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.885
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.885
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.885
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.885
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.885
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.879
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.879
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.876
CBG09380 Caenorhabditis briggsae CBG09380 I 0.875
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.875
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.873
L889_g7780 Steinernema feltiae L889_g7780 I 0.873
L892_g8671 Steinernema scapterisci L892_g8671 I 0.873
L898_g22454 Steinernema monticolum L898_g22454 I 0.873
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.868
L893_g25227 Steinernema glaseri L893_g25227 I 0.868
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.868
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.868
CRE25378 Caenorhabditis remanei CRE25378 I 0.867
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.867
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.867
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.867
ASU_12501 Ascaris suum ASU_12501 I 0.867
NECAME_00872 Necator americanus NECAME_00872 I 0.867
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.866
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.866
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.866
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.866
Hba_12764 Heterorhabditis bacteriophora Hba_12764 N 0.864
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.862
CBG16594 Caenorhabditis briggsae CBG16594 I 0.861
CBN20518 Caenorhabditis brenneri CBN20518 I 0.861
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.861
CBG23380 Caenorhabditis briggsae CBG23380 D 0.856
CBN28497 Caenorhabditis brenneri CBN28497 I 0.856
CRE27050 Caenorhabditis remanei CRE27050 I 0.856
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.856
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.853
PPA24468 Pristionchus pacificus PPA24468 I 0.848
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.848
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.848
CBN29725 Caenorhabditis brenneri CBN29725 I 0.846
CRE27053 Caenorhabditis remanei CRE27053 I 0.846
ANCCEY_01235 Ancylostoma ceylanicum ANCCEY_01235 N 0.835
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.834
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.832
ASU_10584 Ascaris suum ASU_10584 I 0.827
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.827
L889_g22901 Steinernema feltiae L889_g22901 I 0.827
L892_g5079 Steinernema scapterisci L892_g5079 I 0.827
L893_g15276 Steinernema glaseri L893_g15276 I 0.827
L898_g8573 Steinernema monticolum L898_g8573 I 0.827
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.827
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.827
CBG26996 Caenorhabditis briggsae CBG26996 I 0.826
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.826
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.824
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.823
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.823
CRE30787 Caenorhabditis remanei CRE30787 I 0.822
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.822
CBN15481 Caenorhabditis brenneri CBN15481 I 0.821
CBN28528 Caenorhabditis brenneri CBN28528 I 0.821
CBN23409 Caenorhabditis brenneri CBN23409 I 0.818
CBN28056 Caenorhabditis brenneri CBN28056 I 0.818
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.813
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.813
TELCIR_12561 Teladorsagia circumcincta TELCIR_12561 N 0.811
CBG23381 Caenorhabditis briggsae CBG23381 I 0.807
CBN28791 Caenorhabditis brenneri CBN28791 I 0.807
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.806
CRE26981 Caenorhabditis remanei CRE26981 I 0.804
ANCCAN_20955 Ancylostoma caninum ANCCAN_20955 N 0.804
CRE27052 Caenorhabditis remanei CRE27052 I 0.801
ASU_13587 Ascaris suum ASU_13587 I 0.800
CJA14829 Caenorhabditis japonica CJA14829 I 0.798
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.797
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.797
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.794
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.793
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.787
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.785
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.784
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.781
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.779
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.779
CJA41479 Caenorhabditis japonica CJA41479 I 0.775
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.774
L889_g11570 Steinernema feltiae L889_g11570 I 0.773
L893_g21283 Steinernema glaseri L893_g21283 I 0.773
L898_g23058 Steinernema monticolum L898_g23058 I 0.773
L892_g4134 Steinernema scapterisci L892_g4134 I 0.771
scaffold204-EXSNAP2012.8 Pristionchus exspectatus scaffold204-EXSNAP2012.8 N 0.771
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.769
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.769
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.769
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.764
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.764
scaffold178-EXSNAP2012.20 Pristionchus exspectatus scaffold178-EXSNAP2012.20 N 0.762
CBG23319 Caenorhabditis briggsae CBG23319 I 0.761
ASU_02757 Ascaris suum ASU_02757 N 0.761
LOAG_08636 Loa loa LOAG_08636 I 0.760
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.760
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.760
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.760
PPA27013 Pristionchus pacificus PPA27013 N 0.759
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.758
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.757
CBG23318 Caenorhabditis briggsae CBG23318 I 0.754
CRE26982 Caenorhabditis remanei CRE26982 I 0.754
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.754
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.754
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.754
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.754
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.754
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.754
Minc11307 Meloidogyne incognita Minc11307 I 0.751
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.751
ASU_02770 Ascaris suum ASU_02770 I 0.747
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.747
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.747
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.747